Detailed information NTG0395847

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GFM36_RS18725
• Genome accession: NZ_CP045645
• Coordinates: 3849495..3850553 (-)
• Length: 352 a.a.
• NCBI ID: WP_038346731.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1056
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3844495..3855553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFM36_RS18700 (GFM36_18780)	aroK	3844770..3845339 (-)	570	WP_000643712.1	shikimate kinase AroK	-
GFM36_RS18705 (GFM36_18785)	pilQ	3845351..3847516 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
GFM36_RS18710 (GFM36_18790)	pilP	3847579..3848106 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
GFM36_RS18715 (GFM36_18795)	pilO	3848117..3848857 (-)	741	WP_000076099.1	type 4a pilus biogenesis protein PilO	Machinery gene
GFM36_RS18720 (GFM36_18800)	pilN	3848854..3849495 (-)	642	WP_020753500.1	PilN domain-containing protein	Machinery gene
GFM36_RS18725 (GFM36_18805)	pilM	3849495..3850553 (-)	1059	WP_038346731.1	pilus assembly protein PilM	Machinery gene
GFM36_RS18730 (GFM36_18810)	ponA	3850714..3853269 (+)	2556	WP_000736683.1	penicillin-binding protein PBP1a	-
GFM36_RS18735 (GFM36_18815)	-	3853287..3854111 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
GFM36_RS18740 (GFM36_18820)	-	3854114..3854446 (-)	333	WP_000169603.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39060.64 Da
• Isoelectric Point: 4.4618

>NTDB_id=395847 GFM36_RS18725 WP_038346731.1 3849495..3850553(-) (pilM) [Acinetobacter baumannii strain XH1056]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=395847 GFM36_RS18725 WP_038346731.1 3849495..3850553(-) (pilM) [Acinetobacter baumannii strain XH1056]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42