Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GFM36_RS18655 | Genome accession | NZ_CP045645 |
| Coordinates | 3832108..3832557 (-) | Length | 149 a.a. |
| NCBI ID | WP_020753494.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain XH1056 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3827108..3837557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFM36_RS18630 (GFM36_18705) | - | 3827474..3827857 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| GFM36_RS18635 (GFM36_18710) | - | 3828067..3828261 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| GFM36_RS18640 (GFM36_18715) | bfr | 3828506..3828970 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| GFM36_RS18645 (GFM36_18720) | - | 3829011..3830639 (-) | 1629 | WP_001195768.1 | O-antigen ligase family protein | - |
| GFM36_RS18650 (GFM36_18725) | - | 3830746..3832057 (-) | 1312 | Protein_3635 | O-antigen ligase family protein | - |
| GFM36_RS18655 (GFM36_18735) | pilA | 3832108..3832557 (-) | 450 | WP_020753494.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| GFM36_RS18660 (GFM36_18740) | - | 3832899..3833459 (-) | 561 | WP_020753495.1 | TPM domain-containing protein | - |
| GFM36_RS18665 (GFM36_18745) | - | 3833453..3834535 (-) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| GFM36_RS18670 (GFM36_18750) | - | 3834557..3835147 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| GFM36_RS18675 (GFM36_18755) | - | 3835279..3836166 (-) | 888 | WP_001017323.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15140.23 Da Isoelectric Point: 8.4527
>NTDB_id=395842 GFM36_RS18655 WP_020753494.1 3832108..3832557(-) (pilA) [Acinetobacter baumannii strain XH1056]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
Nucleotide
Download Length: 450 bp
>NTDB_id=395842 GFM36_RS18655 WP_020753494.1 3832108..3832557(-) (pilA) [Acinetobacter baumannii strain XH1056]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
67.785 |
100 |
0.678 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae strain A1552 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae C6706 |
40 |
100 |
0.403 |