Detailed information NTG0395836

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: GFM36_RS18575
• Genome accession: NZ_CP045645
• Coordinates: 3815611..3816093 (-)
• Length: 160 a.a.
• NCBI ID: WP_020753490.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain XH1056
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3810611..3821093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFM36_RS18540 (GFM36_18615)	-	3810719..3811753 (+)	1035	WP_001189446.1	lipase secretion chaperone	-
GFM36_RS18545 (GFM36_18620)	-	3811868..3812809 (+)	942	WP_085916958.1	triacylglycerol lipase	-
GFM36_RS18550 (GFM36_18625)	rplS	3812861..3813229 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
GFM36_RS18555 (GFM36_18630)	trmD	3813437..3814177 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GFM36_RS18560 (GFM36_18635)	rimM	3814223..3814771 (-)	549	WP_020753489.1	ribosome maturation factor RimM	-
GFM36_RS18565 (GFM36_18640)	rpsP	3814791..3815042 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
GFM36_RS18570 (GFM36_18645)	pilE	3815189..3815614 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
GFM36_RS18575 (GFM36_18650)	pilY2	3815611..3816093 (-)	483	WP_020753490.1	type IV pilin protein	Machinery gene
GFM36_RS18580 (GFM36_18655)	pilY1	3816106..3819960 (-)	3855	WP_020753491.1	PilC/PilY family type IV pilus protein	Machinery gene
GFM36_RS18585 (GFM36_18660)	pilX	3819972..3820790 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17593.81 Da
• Isoelectric Point: 8.4834

>NTDB_id=395836 GFM36_RS18575 WP_020753490.1 3815611..3816093(-) (pilY2) [Acinetobacter baumannii strain XH1056]
MNKYSILRFNQGVTLIELMVVIVIVAIFTSIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=395836 GFM36_RS18575 WP_020753490.1 3815611..3816093(-) (pilY2) [Acinetobacter baumannii strain XH1056]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTACTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	92.5	100	0.925
comE	Acinetobacter baylyi ADP1	38.372	100	0.412