Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GFM36_RS18570 | Genome accession | NZ_CP045645 |
| Coordinates | 3815189..3815614 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain XH1056 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3810189..3820614
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFM36_RS18540 (GFM36_18615) | - | 3810719..3811753 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| GFM36_RS18545 (GFM36_18620) | - | 3811868..3812809 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| GFM36_RS18550 (GFM36_18625) | rplS | 3812861..3813229 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| GFM36_RS18555 (GFM36_18630) | trmD | 3813437..3814177 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GFM36_RS18560 (GFM36_18635) | rimM | 3814223..3814771 (-) | 549 | WP_020753489.1 | ribosome maturation factor RimM | - |
| GFM36_RS18565 (GFM36_18640) | rpsP | 3814791..3815042 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| GFM36_RS18570 (GFM36_18645) | pilE | 3815189..3815614 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| GFM36_RS18575 (GFM36_18650) | pilY2 | 3815611..3816093 (-) | 483 | WP_020753490.1 | type IV pilin protein | Machinery gene |
| GFM36_RS18580 (GFM36_18655) | pilY1 | 3816106..3819960 (-) | 3855 | WP_020753491.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=395835 GFM36_RS18570 WP_000788337.1 3815189..3815614(-) (pilE) [Acinetobacter baumannii strain XH1056]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=395835 GFM36_RS18570 WP_000788337.1 3815189..3815614(-) (pilE) [Acinetobacter baumannii strain XH1056]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |