Detailed information NTG0395446

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: GFB63_RS01330
• Genome accession: NZ_CP045596
• Coordinates: 276477..277403 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus strain TK-P3A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 271477..282403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFB63_RS01300 (GFB63_01355)	-	271554..272348 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
GFB63_RS01305 (GFB63_01360)	-	272533..272910 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
GFB63_RS01310 (GFB63_01365)	-	272915..273613 (+)	699	WP_193838343.1	ABC transporter ATP-binding protein	-
GFB63_RS01315 (GFB63_01370)	-	273625..274410 (+)	786	WP_011681414.1	hypothetical protein	-
GFB63_RS01320 (GFB63_01375)	amiF	274460..275389 (-)	930	WP_193838344.1	ATP-binding cassette domain-containing protein	Regulator
GFB63_RS01325 (GFB63_01380)	amiE	275382..276467 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
GFB63_RS01330 (GFB63_01385)	amiD	276477..277403 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
GFB63_RS01335 (GFB63_01390)	amiC	277403..278896 (-)	1494	WP_024010009.1	ABC transporter permease	Regulator
GFB63_RS01340 (GFB63_01395)	amiA3	278962..280932 (-)	1971	WP_193838345.1	peptide ABC transporter substrate-binding protein	Regulator
GFB63_RS01345 (GFB63_01400)	-	281169..281359 (-)	191	Protein_279	IS3 family transposase	-
GFB63_RS10405	-	281353..281763 (-)	411	Protein_280	ATP-binding cassette domain-containing protein	-
GFB63_RS01360 (GFB63_01415)	-	281795..282109 (-)	315	Protein_281	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=395446 GFB63_RS01330 WP_084828982.1 276477..277403(-) (amiD) [Streptococcus thermophilus strain TK-P3A]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=395446 GFB63_RS01330 WP_084828982.1 276477..277403(-) (amiD) [Streptococcus thermophilus strain TK-P3A]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterProScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961