Detailed information NTG0394862

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: DLI71_RS07245
• Genome accession: NZ_CP045528
• Coordinates: 1465753..1466871 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain 6507
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1460753..1471871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLI71_RS07235 (DLI71_07235)	-	1463869..1464561 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
DLI71_RS07240 (DLI71_07240)	pilT	1464688..1465725 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
DLI71_RS07245 (DLI71_07245)	pilU	1465753..1466871 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
DLI71_RS07250 (DLI71_07250)	fur	1466941..1467378 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
DLI71_RS07255 (DLI71_07255)	-	1467490..1467888 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
DLI71_RS07260 (DLI71_07260)	-	1467943..1468266 (-)	324	WP_000442587.1	RnfH family protein	-
DLI71_RS07265 (DLI71_07265)	-	1468266..1469330 (-)	1065	WP_100783534.1	hypothetical protein	-
DLI71_RS07270 (DLI71_07270)	-	1469483..1469938 (-)	456	WP_000782976.1	bacteriohemerythrin	-
DLI71_RS07275 (DLI71_07275)	-	1470191..1471039 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=394862 DLI71_RS07245 WP_000347039.1 1465753..1466871(+) (pilU) [Acinetobacter baumannii strain 6507]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=394862 DLI71_RS07245 WP_000347039.1 1465753..1466871(+) (pilU) [Acinetobacter baumannii strain 6507]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395