Detailed information NTG0394471

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: GE022_RS00375
• Genome accession: NZ_CP053790
• Coordinates: 58020..59018 (+)
• Length: 332 a.a.
• NCBI ID: WP_164405431.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_77_2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 53020..64018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE022_RS00355 (GE022_000355)	purE	53392..53883 (+)	492	WP_003046002.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
GE022_RS00360 (GE022_000360)	purK	53870..54940 (+)	1071	WP_164405430.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
GE022_RS00365 (GE022_000365)	purB	55459..56751 (+)	1293	WP_164228814.1	adenylosuccinate lyase	-
GE022_RS00370 (GE022_000370)	comR	56888..57799 (+)	912	WP_003046007.1	helix-turn-helix domain-containing protein	Regulator
GE022_RS10520	comS	57886..57987 (+)	102	WP_217267493.1	quorum-sensing system DWW-type pheromone	Regulator
GE022_RS00375 (GE022_000375)	ruvB	58020..59018 (+)	999	WP_164405431.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
GE022_RS00380 (GE022_000380)	-	59159..59602 (+)	444	WP_093999215.1	low molecular weight protein-tyrosine-phosphatase	-
GE022_RS00385 (GE022_000385)	-	59619..60020 (+)	402	WP_003046016.1	MORN repeat-containing protein	-
GE022_RS00390 (GE022_000390)	-	60017..61792 (+)	1776	WP_164405432.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37410.94 Da
• Isoelectric Point: 4.6446

>NTDB_id=394471 GE022_RS00375 WP_164405431.1 58020..59018(+) (ruvB) [Streptococcus canis strain HL_77_2]
MARILDNDIMGDEELVERTLRPQYLREYIGQDKVKEQLTIFIKAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNV
KQISGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFEMEIIHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
TQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVVTEK
AYHHLGYPYQSH

Nucleotide

• Length: 999 bp

>NTDB_id=394471 GE022_RS00375 WP_164405431.1 58020..59018(+) (ruvB) [Streptococcus canis strain HL_77_2]
ATGGCTAGAATTTTAGATAATGATATAATGGGGGACGAGGAGCTTGTTGAGCGAACTCTTCGTCCACAGTACTTGCGTGA
GTACATCGGGCAAGATAAAGTTAAAGAACAGTTAACCATTTTTATTAAAGCAGCTAAGCTGCGTGATGAGTCTTTGGATC
ATGTCTTGCTGTTTGGTCCTCCAGGGTTAGGGAAAACGACTATGGCATTTGTGATTGCTAATGAATTAGGGGTTAATGTG
AAGCAAATCTCAGGTCCAGCGATTGAAAAGGCTGGAGACTTGGTGGCCATTTTGAATGATTTGGAACCGGGGGATGTCTT
ATTTATTGATGAAATTCATCGCATGCCGATGGCTGTTGAGGAAGTGCTGTATAGCGCTATGGAAGATTTTTATATTGACA
TTATGATTGGTGCTGGAGATACCAGTCGAAGTGTTCATTTGGATTTACCGCCCTTTACGTTGATTGGTGCGACAACGCGA
GCTGGGATGTTATCAAATCCTTTGCGAGCTCGTTTTGGTATTACTGGACACATGGAGTATTATCAGGAAGCTGATTTGAC
TGAAATTGTGGAACGGACAGCGGATATTTTTGAAATGGAAATTATCCACGAGGCGGCCCAAGAGCTAGCTTGTCGCAGTC
GAGGAACCCCACGTATTGCCAATCGATTATTAAAACGAGTACGTGACTATGCTCAAATTGTTGGAGATGGAGTGATTACG
ACGCAAATCACGGATAAGGCTTTAACCATGTTGGATGTTGACCGAGAAGGGCTTGATTATGTGGACCAAAAGATTTTACG
AACCATGATTGAAATGTATCAGGGTGGTCCGGTTGGTTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACGG
TTGAAGACATGTATGAACCCTATTTAATTCAAAAAGGGTTTCTAATGCGTACGCGCACTGGTCGTGTAGTAACTGAAAAA
GCCTATCATCATCTTGGCTACCCTTACCAAAGCCATTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	88.788	99.398	0.883
ruvB	Streptococcus pneumoniae R6	88.788	99.398	0.883
ruvB	Streptococcus pneumoniae D39	88.788	99.398	0.883
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.681	97.289	0.59
ruvB	Helicobacter pylori 26695	49.693	98.193	0.488
ruvB	Synechocystis sp. PCC 6803	49.521	94.277	0.467