Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SA08028_RS08465 | Genome accession | NZ_CP045435 |
| Coordinates | 1705177..1705476 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 08-028 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1700177..1710476
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA08028_RS08440 (SA08028_02975) | gcvPA | 1701389..1702735 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SA08028_RS08445 (SA08028_01307) | gcvT | 1702755..1703846 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SA08028_RS08450 (SA08028_01308) | - | 1704005..1704529 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| SA08028_RS08455 | - | 1704519..1704665 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SA08028_RS08460 | comGF | 1704762..1705259 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SA08028_RS08465 (SA08028_02977) | comGE | 1705177..1705476 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SA08028_RS08470 (SA08028_02978) | comGD | 1705463..1705909 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SA08028_RS08475 (SA08028_02979) | comGC | 1705887..1706198 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SA08028_RS08480 (SA08028_01311) | comGB | 1706212..1707282 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SA08028_RS08485 (SA08028_02980) | comGA | 1707254..1708228 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SA08028_RS08490 (SA08028_01313) | - | 1708280..1708903 (-) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| SA08028_RS08495 (SA08028_02981) | - | 1708900..1709229 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SA08028_RS08500 (SA08028_01314) | - | 1709229..1710215 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SA08028_RS08505 (SA08028_02982) | - | 1710212..1710415 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=394103 SA08028_RS08465 WP_000844413.1 1705177..1705476(-) (comGE) [Staphylococcus aureus strain 08-028]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=394103 SA08028_RS08465 WP_000844413.1 1705177..1705476(-) (comGE) [Staphylococcus aureus strain 08-028]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |