Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GBB76_RS03830 | Genome accession | NZ_CP045144 |
| Coordinates | 795040..795588 (+) | Length | 182 a.a. |
| NCBI ID | WP_152302058.1 | Uniprot ID | A0A5P8MW18 |
| Organism | Ancylobacter sp. TS-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 790040..800588
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBB76_RS03815 (GBB76_03815) | - | 790083..790325 (-) | 243 | WP_152302055.1 | DUF2842 domain-containing protein | - |
| GBB76_RS03820 (GBB76_03820) | - | 790481..791548 (+) | 1068 | WP_152302056.1 | COX15/CtaA family protein | - |
| GBB76_RS03825 (GBB76_03825) | uvrA | 791643..794546 (-) | 2904 | WP_152302057.1 | excinuclease ABC subunit UvrA | - |
| GBB76_RS18715 | - | 794614..794778 (-) | 165 | WP_202911164.1 | hypothetical protein | - |
| GBB76_RS03830 (GBB76_03830) | ssb | 795040..795588 (+) | 549 | WP_152302058.1 | single-stranded DNA-binding protein | Machinery gene |
| GBB76_RS03835 (GBB76_03835) | - | 795920..796318 (+) | 399 | WP_152302059.1 | DUF2306 domain-containing protein | - |
| GBB76_RS03840 (GBB76_03840) | - | 796340..796966 (-) | 627 | WP_152302060.1 | MarC family protein | - |
| GBB76_RS03845 (GBB76_03845) | gyrA | 797344..800100 (+) | 2757 | WP_152302061.1 | DNA gyrase subunit A | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 19198.03 Da Isoelectric Point: 5.9952
>NTDB_id=392324 GBB76_RS03830 WP_152302058.1 795040..795588(+) (ssb) [Ancylobacter sp. TS-1]
MAGSVNKVILIGNLGRDPEVRTFQNGGRVCNLRIATSETWRDKATGERKERTEWHSVVIFNENLLRVAEQYLRKGTKVYI
EGQIETRKATDQNGGERYFTEVVLRPFRGELTILDSRSGGSEGGGGGDDYSAGSDFGSGSGSSFGGGSASRASGGERKPA
PASGGGGGGKFGGGDLDDEIPF
MAGSVNKVILIGNLGRDPEVRTFQNGGRVCNLRIATSETWRDKATGERKERTEWHSVVIFNENLLRVAEQYLRKGTKVYI
EGQIETRKATDQNGGERYFTEVVLRPFRGELTILDSRSGGSEGGGGGDDYSAGSDFGSGSGSSFGGGSASRASGGERKPA
PASGGGGGGKFGGGDLDDEIPF
Nucleotide
Download Length: 549 bp
>NTDB_id=392324 GBB76_RS03830 WP_152302058.1 795040..795588(+) (ssb) [Ancylobacter sp. TS-1]
ATGGCGGGCAGCGTCAACAAGGTTATCCTGATCGGCAATCTCGGGCGCGACCCCGAGGTGCGTACCTTCCAGAATGGCGG
GCGGGTGTGCAATCTGCGCATCGCCACCTCGGAAACCTGGCGCGACAAGGCCACCGGCGAGCGCAAGGAGCGCACCGAGT
GGCACAGCGTGGTGATCTTCAACGAGAACCTGCTGCGCGTGGCCGAGCAGTATCTGCGCAAGGGCACCAAGGTCTACATC
GAGGGCCAGATCGAGACCCGCAAGGCTACCGACCAGAATGGCGGCGAGCGCTATTTCACCGAGGTCGTGCTGCGCCCGTT
CCGGGGCGAGCTGACCATTCTCGACAGCCGCAGCGGCGGCTCCGAGGGCGGTGGCGGCGGCGACGACTACAGCGCGGGCA
GCGATTTCGGCTCCGGCTCCGGCAGCAGCTTCGGCGGCGGCTCGGCCTCGCGCGCCTCGGGCGGCGAGCGCAAGCCTGCC
CCCGCGAGCGGTGGTGGTGGCGGTGGCAAGTTCGGGGGCGGGGACCTCGACGACGAGATCCCGTTCTGA
ATGGCGGGCAGCGTCAACAAGGTTATCCTGATCGGCAATCTCGGGCGCGACCCCGAGGTGCGTACCTTCCAGAATGGCGG
GCGGGTGTGCAATCTGCGCATCGCCACCTCGGAAACCTGGCGCGACAAGGCCACCGGCGAGCGCAAGGAGCGCACCGAGT
GGCACAGCGTGGTGATCTTCAACGAGAACCTGCTGCGCGTGGCCGAGCAGTATCTGCGCAAGGGCACCAAGGTCTACATC
GAGGGCCAGATCGAGACCCGCAAGGCTACCGACCAGAATGGCGGCGAGCGCTATTTCACCGAGGTCGTGCTGCGCCCGTT
CCGGGGCGAGCTGACCATTCTCGACAGCCGCAGCGGCGGCTCCGAGGGCGGTGGCGGCGGCGACGACTACAGCGCGGGCA
GCGATTTCGGCTCCGGCTCCGGCAGCAGCTTCGGCGGCGGCTCGGCCTCGCGCGCCTCGGGCGGCGAGCGCAAGCCTGCC
CCCGCGAGCGGTGGTGGTGGCGGTGGCAAGTTCGGGGGCGGGGACCTCGACGACGAGATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
45.361 |
100 |
0.484 |
| ssb | Vibrio cholerae strain A1552 |
46.629 |
97.802 |
0.456 |
| ssb | Neisseria meningitidis MC58 |
39.785 |
100 |
0.407 |
| ssb | Neisseria gonorrhoeae MS11 |
38.743 |
100 |
0.407 |