Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   GA636_RS02145 Genome accession   NZ_CP045135
Coordinates   446588..447730 (+) Length   380 a.a.
NCBI ID   WP_104484686.1    Uniprot ID   -
Organism   Acinetobacter indicus strain XG01     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 441588..452730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA636_RS02125 - 442186..444183 (-) 1998 WP_104473505.1 TonB-dependent copper receptor -
  GA636_RS02130 - 444257..444679 (-) 423 WP_016658991.1 DUF2946 family protein -
  GA636_RS02135 def 444770..445294 (-) 525 WP_005181462.1 peptide deformylase -
  GA636_RS02140 tsaP 445414..446571 (+) 1158 WP_016658990.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  GA636_RS02145 dprA 446588..447730 (+) 1143 WP_104484686.1 DNA-processing protein DprA Machinery gene
  GA636_RS02150 - 447775..448341 (+) 567 WP_104473507.1 L-threonylcarbamoyladenylate synthase -
  GA636_RS02155 - 448722..449633 (-) 912 WP_045796654.1 DMT family transporter -
  GA636_RS02160 - 449962..450504 (+) 543 WP_104473509.1 glutathione peroxidase -
  GA636_RS02165 - 450688..451296 (+) 609 WP_075168152.1 hypothetical protein -
  GA636_RS02170 - 451383..452350 (-) 968 Protein_411 IS30 family transposase -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42124.92 Da        Isoelectric Point: 6.8775

>NTDB_id=392211 GA636_RS02145 WP_104484686.1 446588..447730(+) (dprA) [Acinetobacter indicus strain XG01]
MLNTISPGHLATIRLWYLVQHSLPSFYKLIRHFGSAAAATEAGNLQRWAELGLHQNHLQRARDFHQAQAQADFQHLLQRV
QQHTDFILIPEDVGYPTQLLPYADKPPILFGQGQAQPLLQPQVAIVGSRKASPHGRQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHQGGLKHQRTIAVMGTGLDLTYPTTHQGLRDQILQQHGTIISEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LDSGSLITAKLAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWLSQQQATLSGTASAATHPT
LPEHLLALYSQLDWVGKNMDQLASELQQETAHLTAQLMELELLGMAMQQSGLYLRCRPSQ

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=392211 GA636_RS02145 WP_104484686.1 446588..447730(+) (dprA) [Acinetobacter indicus strain XG01]
ATGCTGAATACGATATCACCCGGTCATCTCGCAACGATTCGCCTGTGGTATCTGGTTCAGCATTCACTCCCCAGCTTTTA
TAAATTAATCCGGCACTTCGGTTCGGCCGCTGCGGCCACCGAAGCCGGCAACCTGCAGCGCTGGGCAGAACTGGGACTGC
ATCAGAACCATCTGCAACGCGCACGGGATTTTCATCAAGCACAGGCACAAGCCGACTTCCAGCACTTGCTGCAGCGCGTC
CAGCAACATACCGATTTTATTCTTATTCCCGAAGATGTCGGTTACCCCACCCAACTGCTGCCCTATGCCGATAAGCCACC
GATTTTATTTGGTCAGGGACAGGCGCAACCTTTACTTCAGCCACAAGTGGCAATTGTCGGCAGTCGCAAAGCCAGTCCGC
ATGGCCGGCAGGTGGCTTATGACTTTGCCTATTATTTAAGTGAAAAAGGCTTTTTTATTAACAGTGGCCTGGCGCAAGGC
ATTGATGAAGCAGCCCATCAGGGCGGCCTAAAACATCAACGTACCATTGCCGTGATGGGTACTGGTCTGGACTTAACCTA
CCCAACCACACATCAGGGTCTGCGTGACCAGATTCTGCAACAGCATGGCACTATTATCAGTGAGTTCCTGCCACAGACTA
AACCGCTACAGCAGCATTTTCCACGGCGCAACCGCATTGTCAGTGGACTTAGCCTGGGGGTGATTGTGGCTGAAGCCACG
CTGGACAGCGGCTCGCTGATTACCGCCAAACTGGCGGCCGAGCAAGGTAAAACCGTGTTTGCCATTCCGGGACATATTTA
CAGTGAATTTCATCAGGGCTGCCATCAACTGATTCGGGAAGGTGCAATTCTGGTCGATCATCCGGAACAGGTCATTGAAG
ACCTGGCCTTGCCAACCCAATGGCTGAGTCAACAGCAGGCGACCTTATCTGGTACAGCATCTGCGGCTACCCACCCGACC
TTACCCGAACATCTGCTGGCCCTATACAGCCAGCTGGACTGGGTTGGAAAAAATATGGACCAGCTGGCCAGCGAACTGCA
ACAGGAAACCGCCCATTTAACCGCGCAGTTAATGGAACTGGAGCTGCTCGGGATGGCGATGCAGCAATCGGGGCTATATC
TGCGTTGTCGTCCATCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

69.231

99.211

0.687

  dprA Acinetobacter baumannii D1279779

68.519

99.474

0.682

  dprA Acinetobacter baylyi ADP1

64.66

100

0.65

  dprA Vibrio cholerae strain A1552

43.155

88.421

0.382


Multiple sequence alignment