Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F9230_RS00900 | Genome accession | NZ_CP045099 |
| Coordinates | 214662..215246 (+) | Length | 194 a.a. |
| NCBI ID | WP_004691666.1 | Uniprot ID | A0A7H8SPE4 |
| Organism | Acinetobacter johnsonii strain AJ14 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 209662..220246
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9230_RS17240 | - | 210463..210585 (-) | 123 | WP_256350717.1 | hypothetical protein | - |
| F9230_RS00880 (F9230_00880) | - | 210586..210960 (-) | 375 | WP_004978208.1 | hypothetical protein | - |
| F9230_RS00885 (F9230_00885) | tenA | 211121..211795 (-) | 675 | WP_201701835.1 | thiaminase II | - |
| F9230_RS00890 (F9230_00890) | - | 212007..213086 (+) | 1080 | WP_058870674.1 | DUF475 domain-containing protein | - |
| F9230_RS00895 (F9230_00895) | - | 213246..214610 (+) | 1365 | WP_234951012.1 | MFS transporter | - |
| F9230_RS00900 (F9230_00900) | ssb | 214662..215246 (+) | 585 | WP_004691666.1 | single-stranded DNA-binding protein | Machinery gene |
| F9230_RS00905 (F9230_00905) | - | 215454..216872 (-) | 1419 | WP_234951013.1 | aspartate ammonia-lyase | - |
| F9230_RS00910 (F9230_00910) | - | 217007..217897 (+) | 891 | WP_218288612.1 | LysR substrate-binding domain-containing protein | - |
| F9230_RS00915 (F9230_00915) | - | 218021..219319 (-) | 1299 | WP_234951014.1 | dicarboxylate/amino acid:cation symporter | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21300.03 Da Isoelectric Point: 6.4819
>NTDB_id=391846 F9230_RS00900 WP_004691666.1 214662..215246(+) (ssb) [Acinetobacter johnsonii strain AJ14]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPAAGNSNNQQ
SGYANNNPSGFAPKAAPQSAPAAAPADMDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPAAGNSNNQQ
SGYANNNPSGFAPKAAPQSAPAAAPADMDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=391846 F9230_RS00900 WP_004691666.1 214662..215246(+) (ssb) [Acinetobacter johnsonii strain AJ14]
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAACGGTGGTTC
GTTGACCCAGTTTTCAATTGCAACGAGCGACTCTTGGACAGACAAAAGCACAGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGTTACACAACCGTCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGT
TCACTGCGTACTCGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTCGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAACAATAACAACAACCAAGGCGGTTATGGCGGCAATCCTGCAGCGGGCAATAGCAACAACCAACAA
AGTGGTTATGCGAACAATAACCCAAGCGGTTTTGCACCAAAGGCGGCTCCTCAGTCAGCGCCTGCGGCAGCACCAGCAGA
TATGGATGATGATCTTCCATTCTGA
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAACGGTGGTTC
GTTGACCCAGTTTTCAATTGCAACGAGCGACTCTTGGACAGACAAAAGCACAGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGTTACACAACCGTCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGT
TCACTGCGTACTCGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTCGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAACAATAACAACAACCAAGGCGGTTATGGCGGCAATCCTGCAGCGGGCAATAGCAACAACCAACAA
AGTGGTTATGCGAACAATAACCCAAGCGGTTTTGCACCAAAGGCGGCTCCTCAGTCAGCGCCTGCGGCAGCACCAGCAGA
TATGGATGATGATCTTCCATTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.246 |
100 |
0.526 |
| ssb | Vibrio cholerae strain A1552 |
44.724 |
100 |
0.459 |
| ssb | Neisseria meningitidis MC58 |
41.414 |
100 |
0.423 |
| ssb | Neisseria gonorrhoeae MS11 |
41.414 |
100 |
0.423 |