Detailed information NTG0390784

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: F7R60_RS04195
• Genome accession: NZ_CP044519
• Coordinates: 886626..887744 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347037.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 29FS20
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 881626..892744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7R60_RS04165 (F7R60_04210)	-	882455..883303 (+)	849	WP_000336552.1	class II glutamine amidotransferase	-
F7R60_RS04170 (F7R60_04215)	-	883556..884011 (+)	456	WP_000782976.1	bacteriohemerythrin	-
F7R60_RS04175 (F7R60_04225)	-	884164..885231 (+)	1068	WP_029777564.1	membrane protein	-
F7R60_RS04180 (F7R60_04230)	-	885231..885554 (+)	324	WP_000442589.1	RnfH family protein	-
F7R60_RS04185 (F7R60_04235)	-	885609..886007 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
F7R60_RS04190 (F7R60_04240)	fur	886119..886556 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
F7R60_RS04195 (F7R60_04245)	pilU	886626..887744 (-)	1119	WP_000347037.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
F7R60_RS04200 (F7R60_04250)	pilT	887772..888809 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
F7R60_RS04205 (F7R60_04255)	-	888936..889628 (+)	693	WP_001108505.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41919.10 Da
• Isoelectric Point: 6.6943

>NTDB_id=390784 F7R60_RS04195 WP_000347037.1 886626..887744(-) (pilU) [Acinetobacter baumannii strain 29FS20]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=390784 F7R60_RS04195 WP_000347037.1 886626..887744(-) (pilU) [Acinetobacter baumannii strain 29FS20]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACTAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ATGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392