Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   F7R97_RS00885 Genome accession   NZ_CP044517
Coordinates   191278..192408 (-) Length   376 a.a.
NCBI ID   WP_002013158.1    Uniprot ID   A0A1S8V1K1
Organism   Acinetobacter baumannii strain 31FS3-2     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 186278..197408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F7R97_RS00860 (F7R97_00870) - 186453..187217 (-) 765 WP_000786954.1 AraC family transcriptional regulator -
  F7R97_RS00865 (F7R97_00875) - 187239..188453 (-) 1215 WP_000372838.1 MFS transporter -
  F7R97_RS00870 (F7R97_00880) - 188590..189240 (+) 651 WP_085943488.1 TetR/AcrR family transcriptional regulator -
  F7R97_RS00875 (F7R97_00885) - 189346..190266 (+) 921 WP_000084546.1 DMT family transporter -
  F7R97_RS00880 (F7R97_00890) - 190658..191227 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  F7R97_RS00885 (F7R97_00895) dprA 191278..192408 (-) 1131 WP_002013158.1 DNA-processing protein DprA Machinery gene
  F7R97_RS00890 (F7R97_00900) tsaP 192429..193583 (-) 1155 WP_140952760.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  F7R97_RS00895 (F7R97_00905) def 193706..194236 (+) 531 WP_001196539.1 peptide deformylase -
  F7R97_RS00900 (F7R97_00910) - 194273..194701 (+) 429 WP_000231981.1 DUF2946 family protein -
  F7R97_RS00905 (F7R97_00915) - 194774..196888 (+) 2115 WP_065712619.1 TonB-dependent copper receptor -
  F7R97_RS00910 (F7R97_00920) - 196942..197148 (+) 207 WP_000182542.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41900.40 Da        Isoelectric Point: 6.5418

>NTDB_id=390720 F7R97_RS00885 WP_002013158.1 191278..192408(-) (dprA) [Acinetobacter baumannii strain 31FS3-2]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
RQHTDFILTADDSGYPSQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=390720 F7R97_RS00885 WP_002013158.1 191278..192408(-) (dprA) [Acinetobacter baumannii strain 31FS3-2]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAACGTGTAAACGAATTTCAAACGCCCCAAGGTCAGGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACTGATTTTATTTTAACGGCAGATGACTCAGGCTACCCCTCTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCACAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1S8V1K1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.404

100

0.984

  dprA Acinetobacter baumannii D1279779

98.138

100

0.981

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

42.9

88.032

0.378


Multiple sequence alignment