Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FSC11_RS13860 | Genome accession | NZ_CP044483 |
| Coordinates | 2898733..2899314 (-) | Length | 193 a.a. |
| NCBI ID | WP_071320869.1 | Uniprot ID | A0A1P8PGJ6 |
| Organism | Acinetobacter schindleri strain HZE30-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2893733..2904314
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC11_RS13835 (FSC11_13875) | - | 2893778..2895085 (-) | 1308 | WP_163167494.1 | FAD-dependent oxidoreductase | - |
| FSC11_RS13840 (FSC11_13880) | - | 2895500..2896378 (-) | 879 | WP_163167496.1 | pirin family protein | - |
| FSC11_RS13845 (FSC11_13885) | ahpC | 2896703..2897266 (-) | 564 | WP_048882204.1 | alkyl hydroperoxide reductase subunit C | - |
| FSC11_RS13850 (FSC11_13890) | - | 2897434..2898048 (-) | 615 | WP_163167498.1 | TetR/AcrR family transcriptional regulator | - |
| FSC11_RS13855 (FSC11_13895) | - | 2898193..2898678 (+) | 486 | WP_163167500.1 | hotdog fold domain-containing protein | - |
| FSC11_RS13860 (FSC11_13900) | ssb | 2898733..2899314 (-) | 582 | WP_071320869.1 | single-stranded DNA-binding protein | Machinery gene |
| FSC11_RS13865 (FSC11_13905) | - | 2899366..2900730 (-) | 1365 | WP_103800195.1 | MFS transporter | - |
| FSC11_RS13870 (FSC11_13910) | - | 2900886..2901971 (-) | 1086 | WP_163167502.1 | DUF475 domain-containing protein | - |
| FSC11_RS13875 (FSC11_13915) | tenA | 2902194..2902862 (+) | 669 | WP_048882199.1 | thiaminase II | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20976.78 Da Isoelectric Point: 6.4820
>NTDB_id=390268 FSC11_RS13860 WP_071320869.1 2898733..2899314(-) (ssb) [Acinetobacter schindleri strain HZE30-1]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGGYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGGYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=390268 FSC11_RS13860 WP_071320869.1 2898733..2899314(-) (ssb) [Acinetobacter schindleri strain HZE30-1]
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCGAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACCACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCG
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCGAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACCACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCG
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.515 |
100 |
0.508 |
| ssb | Vibrio cholerae strain A1552 |
44.67 |
100 |
0.456 |
| ssb | Neisseria gonorrhoeae MS11 |
41.053 |
98.446 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
41.053 |
98.446 |
0.404 |