Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FSC12_RS06520 | Genome accession | NZ_CP044474 |
| Coordinates | 1374552..1375133 (-) | Length | 193 a.a. |
| NCBI ID | WP_071320869.1 | Uniprot ID | A0A1P8PGJ6 |
| Organism | Acinetobacter schindleri strain HZE33-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1369552..1380133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC12_RS06495 (FSC12_06550) | - | 1369596..1370903 (-) | 1308 | WP_005220638.1 | FAD-dependent oxidoreductase | - |
| FSC12_RS06500 (FSC12_06555) | - | 1371318..1372196 (-) | 879 | WP_163168821.1 | pirin family protein | - |
| FSC12_RS06505 (FSC12_06560) | ahpC | 1372522..1373085 (-) | 564 | WP_048882204.1 | alkyl hydroperoxide reductase subunit C | - |
| FSC12_RS06510 (FSC12_06565) | - | 1373253..1373867 (-) | 615 | WP_163168822.1 | TetR/AcrR family transcriptional regulator | - |
| FSC12_RS06515 (FSC12_06570) | - | 1374012..1374497 (+) | 486 | WP_163168823.1 | hotdog fold domain-containing protein | - |
| FSC12_RS06520 (FSC12_06575) | ssb | 1374552..1375133 (-) | 582 | WP_071320869.1 | single-stranded DNA-binding protein | Machinery gene |
| FSC12_RS06525 (FSC12_06580) | - | 1375185..1376549 (-) | 1365 | WP_005220623.1 | MFS transporter | - |
| FSC12_RS06530 (FSC12_06585) | - | 1376704..1377789 (-) | 1086 | WP_103800196.1 | DUF475 domain-containing protein | - |
| FSC12_RS06535 (FSC12_06590) | tenA | 1378012..1378680 (+) | 669 | WP_163168824.1 | thiaminase II | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 20976.78 Da Isoelectric Point: 6.4820
>NTDB_id=390201 FSC12_RS06520 WP_071320869.1 1374552..1375133(-) (ssb) [Acinetobacter schindleri strain HZE33-1]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGGYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGGYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=390201 FSC12_RS06520 WP_071320869.1 1374552..1375133(-) (ssb) [Acinetobacter schindleri strain HZE33-1]
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCGAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACTACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCG
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCGAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACTACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCG
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.515 |
100 |
0.508 |
| ssb | Vibrio cholerae strain A1552 |
44.67 |
100 |
0.456 |
| ssb | Neisseria gonorrhoeae MS11 |
41.053 |
98.446 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
41.053 |
98.446 |
0.404 |