Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FSC05_RS00945 | Genome accession | NZ_CP044450 |
| Coordinates | 206391..206957 (+) | Length | 188 a.a. |
| NCBI ID | WP_005180729.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain MMS9-2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 201391..211957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC05_RS00930 (FSC05_00935) | tenA | 202795..203472 (-) | 678 | WP_163140963.1 | thiaminase II | - |
| FSC05_RS00935 (FSC05_00940) | - | 203740..204822 (+) | 1083 | WP_005180731.1 | DUF475 domain-containing protein | - |
| FSC05_RS00940 (FSC05_00945) | - | 204975..206339 (+) | 1365 | WP_075167305.1 | MFS transporter | - |
| FSC05_RS00945 (FSC05_00950) | ssb | 206391..206957 (+) | 567 | WP_005180729.1 | single-stranded DNA-binding protein | Machinery gene |
| FSC05_RS00950 (FSC05_00955) | ahpC | 207200..207763 (+) | 564 | WP_016658414.1 | alkyl hydroperoxide reductase subunit C | - |
| FSC05_RS00955 (FSC05_00960) | - | 207963..208838 (+) | 876 | WP_163140966.1 | pirin family protein | - |
| FSC05_RS00960 (FSC05_00965) | - | 209272..210570 (+) | 1299 | WP_034598019.1 | FAD-dependent oxidoreductase | - |
| FSC05_RS00965 (FSC05_00970) | - | 210574..211398 (+) | 825 | WP_163140969.1 | SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20640.39 Da Isoelectric Point: 6.4819
>NTDB_id=390066 FSC05_RS00945 WP_005180729.1 206391..206957(+) (ssb) [Acinetobacter indicus strain MMS9-2]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDAWTDKTTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGEQGDNGFSQPRFNNNQGGGYSNNNQGGYAPQAQGGFNNNNAGGGY
GNQGGYQQPKPAPAATPAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDAWTDKTTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGEQGDNGFSQPRFNNNQGGGYSNNNQGGYAPQAQGGFNNNNAGGGY
GNQGGYQQPKPAPAATPAPADLDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=390066 FSC05_RS00945 WP_005180729.1 206391..206957(+) (ssb) [Acinetobacter indicus strain MMS9-2]
ATGCGTGGTGTAAATAAGGTCATTTTAGTTGGTACTTTAGGTCGAGATCCAGAAACAAAAACTTTCCCGAATGGTGGCTC
GCTTACTCAATTTTCCATTGCCACCAGTGATGCGTGGACCGATAAAACCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGCTGCATAACCGTTTAGGTGAAATCGCGCAGCAATACTTACGCAAAGGTTCAAAAGTCTATATTGAAGGT
TCATTGCGTACCCGTCAGTGGACCGATCAGAATGGTCAGGAACGCTACACCACAGAAATTCGTGGCGAGCAAATGCAGAT
GCTGGACTCTGGTCGTCAGCAAGGTGAGCAGGGCGATAATGGTTTTAGCCAGCCACGTTTTAACAATAACCAGGGCGGTG
GTTATAGTAATAACAACCAGGGTGGCTATGCGCCGCAAGCTCAAGGTGGTTTTAACAACAATAATGCTGGTGGTGGCTAT
GGCAACCAGGGCGGTTATCAGCAACCGAAACCAGCTCCTGCTGCAACGCCTGCACCGGCAGATTTGGATGATGACTTACC
GTTCTAA
ATGCGTGGTGTAAATAAGGTCATTTTAGTTGGTACTTTAGGTCGAGATCCAGAAACAAAAACTTTCCCGAATGGTGGCTC
GCTTACTCAATTTTCCATTGCCACCAGTGATGCGTGGACCGATAAAACCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGCTGCATAACCGTTTAGGTGAAATCGCGCAGCAATACTTACGCAAAGGTTCAAAAGTCTATATTGAAGGT
TCATTGCGTACCCGTCAGTGGACCGATCAGAATGGTCAGGAACGCTACACCACAGAAATTCGTGGCGAGCAAATGCAGAT
GCTGGACTCTGGTCGTCAGCAAGGTGAGCAGGGCGATAATGGTTTTAGCCAGCCACGTTTTAACAATAACCAGGGCGGTG
GTTATAGTAATAACAACCAGGGTGGCTATGCGCCGCAAGCTCAAGGTGGTTTTAACAACAATAATGCTGGTGGTGGCTAT
GGCAACCAGGGCGGTTATCAGCAACCGAAACCAGCTCCTGCTGCAACGCCTGCACCGGCAGATTTGGATGATGACTTACC
GTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.546 |
100 |
0.532 |
| ssb | Vibrio cholerae strain A1552 |
43.939 |
100 |
0.463 |
| ssb | Neisseria meningitidis MC58 |
38.421 |
100 |
0.388 |
| ssb | Neisseria gonorrhoeae MS11 |
38.421 |
100 |
0.388 |