Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ESD82_RS17065 | Genome accession | NZ_CP044426 |
| Coordinates | 1322498..1323004 (+) | Length | 168 a.a. |
| NCBI ID | WP_024845110.1 | Uniprot ID | A0A1I5JTS5 |
| Organism | Paracoccus pantotrophus strain DSM 2944 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1317498..1328004
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ESD82_RS17045 (ESD82_17045) | - | 1319243..1319809 (-) | 567 | WP_147427759.1 | hypothetical protein | - |
| ESD82_RS17050 (ESD82_17050) | hemB | 1319961..1320959 (+) | 999 | WP_147427758.1 | porphobilinogen synthase | - |
| ESD82_RS17055 (ESD82_17055) | - | 1321030..1321602 (+) | 573 | WP_028710600.1 | YSC84-related protein | - |
| ESD82_RS17060 (ESD82_17060) | - | 1321644..1322291 (-) | 648 | WP_024845111.1 | lytic transglycosylase domain-containing protein | - |
| ESD82_RS17065 (ESD82_17065) | ssb | 1322498..1323004 (+) | 507 | WP_024845110.1 | single-stranded DNA-binding protein | Machinery gene |
| ESD82_RS17070 (ESD82_17070) | - | 1323064..1323834 (-) | 771 | WP_147427757.1 | FadR/GntR family transcriptional regulator | - |
| ESD82_RS17075 (ESD82_17075) | - | 1323843..1325327 (-) | 1485 | WP_147427756.1 | M81 family metallopeptidase | - |
| ESD82_RS17080 (ESD82_17080) | - | 1325324..1326583 (-) | 1260 | WP_167521782.1 | Zn-dependent hydrolase | - |
| ESD82_RS17085 (ESD82_17085) | - | 1326595..1327299 (-) | 705 | WP_147427754.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 17880.43 Da Isoelectric Point: 6.4863
>NTDB_id=389854 ESD82_RS17065 WP_024845110.1 1322498..1323004(+) (ssb) [Paracoccus pantotrophus strain DSM 2944]
MAGSVNKVILVGNLGQDPEIRSFPSGGKVANLRIATSETWKDRNTGERKERTEWHTVAIYSEPLVRVAEQYLKKGSKVYV
EGQLETRKWQDQSGNDRYSTEVALRPFRSELHMLDSRGGGGGGGRDDGYGGGGYGGGGYGGGSSSGGSSSGGGGQSQNRP
DFDDDIPF
MAGSVNKVILVGNLGQDPEIRSFPSGGKVANLRIATSETWKDRNTGERKERTEWHTVAIYSEPLVRVAEQYLKKGSKVYV
EGQLETRKWQDQSGNDRYSTEVALRPFRSELHMLDSRGGGGGGGRDDGYGGGGYGGGGYGGGSSSGGSSSGGGGQSQNRP
DFDDDIPF
Nucleotide
Download Length: 507 bp
>NTDB_id=389854 ESD82_RS17065 WP_024845110.1 1322498..1323004(+) (ssb) [Paracoccus pantotrophus strain DSM 2944]
ATGGCTGGCAGCGTGAACAAGGTGATCCTGGTCGGCAACCTGGGCCAAGACCCGGAGATCCGCAGCTTTCCCAGCGGCGG
CAAGGTCGCCAACCTGCGCATCGCCACGTCCGAGACCTGGAAGGACCGCAATACCGGCGAGCGCAAGGAGCGCACCGAAT
GGCACACGGTCGCCATCTATTCCGAGCCCCTGGTCCGCGTGGCCGAGCAATATCTGAAAAAGGGCTCCAAGGTCTATGTC
GAGGGCCAGCTGGAAACCCGCAAGTGGCAGGACCAGAGCGGCAACGACCGCTATTCGACCGAGGTGGCGCTGCGCCCCTT
CCGCAGCGAGCTGCACATGCTCGACAGCCGCGGCGGCGGCGGTGGCGGCGGCCGCGATGACGGTTATGGCGGCGGCGGTT
ACGGTGGCGGCGGCTATGGCGGCGGCAGCTCGTCGGGCGGCAGTTCCTCGGGCGGCGGCGGGCAATCGCAGAACCGGCCC
GATTTCGACGACGACATCCCGTTCTGA
ATGGCTGGCAGCGTGAACAAGGTGATCCTGGTCGGCAACCTGGGCCAAGACCCGGAGATCCGCAGCTTTCCCAGCGGCGG
CAAGGTCGCCAACCTGCGCATCGCCACGTCCGAGACCTGGAAGGACCGCAATACCGGCGAGCGCAAGGAGCGCACCGAAT
GGCACACGGTCGCCATCTATTCCGAGCCCCTGGTCCGCGTGGCCGAGCAATATCTGAAAAAGGGCTCCAAGGTCTATGTC
GAGGGCCAGCTGGAAACCCGCAAGTGGCAGGACCAGAGCGGCAACGACCGCTATTCGACCGAGGTGGCGCTGCGCCCCTT
CCGCAGCGAGCTGCACATGCTCGACAGCCGCGGCGGCGGCGGTGGCGGCGGCCGCGATGACGGTTATGGCGGCGGCGGTT
ACGGTGGCGGCGGCTATGGCGGCGGCAGCTCGTCGGGCGGCAGTTCCTCGGGCGGCGGCGGGCAATCGCAGAACCGGCCC
GATTTCGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
53.757 |
100 |
0.554 |
| ssb | Glaesserella parasuis strain SC1401 |
47.849 |
100 |
0.53 |
| ssb | Neisseria meningitidis MC58 |
39.894 |
100 |
0.446 |
| ssb | Neisseria gonorrhoeae MS11 |
40.223 |
100 |
0.429 |