Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F6Y31_RS05750 | Genome accession | NZ_CP044338 |
| Coordinates | 1087058..1087564 (-) | Length | 168 a.a. |
| NCBI ID | WP_002964231.1 | Uniprot ID | - |
| Organism | Brucella abortus strain clpP | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1082058..1092564
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y31_RS05725 (F6Y31_05725) | - | 1084112..1084741 (+) | 630 | WP_002967687.1 | MarC family protein | - |
| F6Y31_RS05730 (F6Y31_05730) | phnN | 1084832..1085410 (-) | 579 | WP_002969545.1 | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | - |
| F6Y31_RS05735 (F6Y31_05735) | phnF | 1085597..1086358 (+) | 762 | WP_002966839.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| F6Y31_RS05740 (F6Y31_05740) | - | 1086501..1086902 (+) | 402 | WP_002969546.1 | hypothetical protein | - |
| F6Y31_RS05745 (F6Y31_05745) | - | 1086954..1087154 (+) | 201 | WP_002971429.1 | hypothetical protein | - |
| F6Y31_RS05750 (F6Y31_05750) | ssb | 1087058..1087564 (-) | 507 | WP_002964231.1 | single-stranded DNA-binding protein | Machinery gene |
| F6Y31_RS05755 (F6Y31_05755) | - | 1088132..1088332 (+) | 201 | WP_002964232.1 | hypothetical protein | - |
| F6Y31_RS05760 (F6Y31_05760) | uvrA | 1088463..1091387 (+) | 2925 | WP_002964233.1 | excinuclease ABC subunit UvrA | - |
| F6Y31_RS05765 (F6Y31_05765) | - | 1091574..1091849 (-) | 276 | WP_002964234.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18398.22 Da Isoelectric Point: 5.9777
>NTDB_id=389501 F6Y31_RS05750 WP_002964231.1 1087058..1087564(-) (ssb) [Brucella abortus strain clpP]
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSKEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSKEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
Nucleotide
Download Length: 507 bp
>NTDB_id=389501 F6Y31_RS05750 WP_002964231.1 1087058..1087564(-) (ssb) [Brucella abortus strain clpP]
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAAAGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAAAGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.421 |
100 |
0.548 |
| ssb | Vibrio cholerae strain A1552 |
49.133 |
100 |
0.506 |
| ssb | Neisseria meningitidis MC58 |
38.547 |
100 |
0.411 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.405 |