Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   NMBM04240196_RS07205 Genome accession   NC_017515
Coordinates   1383881..1384501 (-) Length   206 a.a.
NCBI ID   WP_014581480.1    Uniprot ID   -
Organism   Neisseria meningitidis M04-240196     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378881..1389501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM04240196_RS07185 (NMBM04240196_1270) - 1378896..1379321 (+) 426 Protein_1316 AzlC family ABC transporter permease -
  NMBM04240196_RS07190 (NMBM04240196_1271) pilX 1381890..1382363 (-) 474 WP_002258079.1 PilX family type IV pilin Machinery gene
  NMBM04240196_RS07195 (NMBM04240196_1272) pilK 1382368..1382967 (-) 600 WP_002226439.1 pilus assembly protein Machinery gene
  NMBM04240196_RS07200 (NMBM04240196_1273) pilJ 1382946..1383884 (-) 939 WP_014581479.1 PilW family protein Machinery gene
  NMBM04240196_RS07205 (NMBM04240196_1274) pilV 1383881..1384501 (-) 621 WP_014581480.1 type IV pilus modification protein PilV Regulator
  NMBM04240196_RS07210 (NMBM04240196_1275) pilH 1384531..1385199 (-) 669 WP_014581481.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  NMBM04240196_RS07215 (NMBM04240196_1276) dnaB 1385508..1386914 (-) 1407 WP_002219448.1 replicative DNA helicase -
  NMBM04240196_RS07220 (NMBM04240196_1277) - 1387076..1387663 (+) 588 WP_002223431.1 superoxide dismutase -
  NMBM04240196_RS07225 (NMBM04240196_1278) - 1388963..1389472 (-) 510 WP_002227434.1 isoprenylcysteine carboxyl methyltransferase family protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22363.37 Da        Isoelectric Point: 5.6863

>NTDB_id=38903 NMBM04240196_RS07205 WP_014581480.1 1383881..1384501(-) (pilV) [Neisseria meningitidis M04-240196]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YSLYMGNHTLPHTLSAVDGDFAIDAMKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
KANGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 621 bp        

>NTDB_id=38903 NMBM04240196_RS07205 WP_014581480.1 1383881..1384501(-) (pilV) [Neisseria meningitidis M04-240196]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAGTCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATGAA
AACTAAGACGCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAAT
AAGGCAAACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCT
TGAGACGAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

96.602

100

0.966
  pilV/pilI Neisseria gonorrhoeae MS11

83.01

100

0.83

Multiple sequence alignment