Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   HIN89_RS15685 Genome accession   NZ_CP051862
Coordinates   3297262..3299307 (+) Length   681 a.a.
NCBI ID   WP_004742183.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain Ab-C102     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3292262..3304307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HIN89_RS15670 (HIN89_15675) plsB 3292743..3295316 (+) 2574 WP_000045408.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  HIN89_RS15675 (HIN89_15680) adeT2 3295360..3296346 (-) 987 WP_004742186.1 putative multidrug efflux protein AdeT2 -
  HIN89_RS15680 (HIN89_15685) - 3296426..3297241 (-) 816 WP_000547774.1 NAD-dependent epimerase/dehydratase family protein -
  HIN89_RS15685 (HIN89_15690) recG 3297262..3299307 (+) 2046 WP_004742183.1 ATP-dependent DNA helicase RecG Machinery gene
  HIN89_RS15690 (HIN89_15695) comF 3299300..3299935 (+) 636 WP_000472267.1 ComF family protein Machinery gene
  HIN89_RS15695 (HIN89_15700) - 3299938..3300339 (-) 402 WP_000849704.1 NUDIX hydrolase -
  HIN89_RS15700 (HIN89_15705) - 3300354..3300935 (-) 582 WP_001084309.1 TIGR00730 family Rossman fold protein -
  HIN89_RS15705 (HIN89_15710) - 3301093..3302106 (+) 1014 WP_000888321.1 CorA family divalent cation transporter -
  HIN89_RS15710 (HIN89_15715) - 3302176..3302463 (-) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  HIN89_RS15715 (HIN89_15720) - 3302475..3303116 (-) 642 WP_002058237.1 phospholipid-binding protein MlaC -
  HIN89_RS15720 (HIN89_15725) - 3303143..3303823 (-) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -

Sequence


Protein


Download         Length: 681 a.a.        Molecular weight: 76435.01 Da        Isoelectric Point: 7.7343

>NTDB_id=388434 HIN89_RS15685 WP_004742183.1 3297262..3299307(+) (recG) [Acinetobacter baumannii strain Ab-C102]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKHYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLQRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=388434 HIN89_RS15685 WP_004742183.1 3297262..3299307(+) (recG) [Acinetobacter baumannii strain Ab-C102]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACTGACAAAATAAAACCGGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACCC
CCCTTCCAAAAACGCAGCTCACAGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACATTATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCACCAGTTGATGCCAATATGATCCAATTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTACGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTGGCTTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCGCCAGGTCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCAACGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGTAAAATGAAAGCCGATGAAAAACAGGCCGTCATGCAAGCATTTAAAAACAATGAACTACAGC
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCTAACGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATACGCATATGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49

  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405

  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405

  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389


Multiple sequence alignment