Detailed information NTG0388432

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: F4V31_RS01335
• Genome accession: NZ_CP044162
• Coordinates: 275115..276296 (-)
• Length: 393 a.a.
• NCBI ID: WP_002927586.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain AR-0419
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 270115..281296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F4V31_RS01305	-	270660..271001 (+)	342	WP_002784057.1	hypothetical protein	-
F4V31_RS01310	flgM	271064..271261 (+)	198	WP_002779262.1	flagellar biosynthesis anti-sigma factor FlgM	-
F4V31_RS01315	-	271304..271738 (+)	435	WP_002779263.1	flagellar protein FlgN	-
F4V31_RS01320	flgK	271748..273574 (+)	1827	WP_002927583.1	flagellar hook-associated protein FlgK	-
F4V31_RS01325	-	273591..274355 (+)	765	WP_002851318.1	TIGR02757 family protein	-
F4V31_RS01330	-	274359..275122 (+)	764	Protein_257	TSUP family transporter	-
F4V31_RS01335	ctsF	275115..276296 (-)	1182	WP_002927586.1	type II secretion system F family protein	Machinery gene
F4V31_RS01340	ctsE	276293..277852 (-)	1560	WP_011812800.1	GspE/PulE family protein	Machinery gene
F4V31_RS01345	ctsX	277842..278429 (-)	588	WP_002927587.1	hypothetical protein	Machinery gene
F4V31_RS01350	ctsP	278433..279041 (-)	609	WP_002851464.1	ATP-binding protein	Machinery gene
F4V31_RS01355	ctsD	279034..280446 (-)	1413	WP_002856543.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
F4V31_RS01360	ctsR	280424..280735 (-)	312	WP_002855438.1	hypothetical protein	Machinery gene

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 45794.38 Da
• Isoelectric Point: 9.0938

>NTDB_id=388432 F4V31_RS01335 WP_002927586.1 275115..276296(-) (ctsF) [Campylobacter jejuni strain AR-0419]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGTSLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLVFLEPMMTLFVAFLVLFLALGIFLPMWELSSGVNFN

Nucleotide

• Length: 1182 bp

>NTDB_id=388432 F4V31_RS01335 WP_002927586.1 275115..276296(-) (ctsF) [Campylobacter jejuni strain AR-0419]
GTGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTGTCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCACTCTTGCAAGATTATGAAAAAGATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTGAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCACGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTTAGTGTTGCGATGAAAAGCGGAAGACTTGAAGTGCTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGGTTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGTTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (60-179)

• Type II secretion system (T2SS), protein F (T2SSF) (261-382)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	99.235	99.746	0.99