Detailed information NTG0388126

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: F5K02_RS18150
• Genome accession: NZ_CP044132
• Coordinates: 3647964..3649127 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain ZKY01
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3642964..3654127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5K02_RS18120 (F5K02_18285)	-	3643228..3643647 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
F5K02_RS18125 (F5K02_18290)	comFC	3643721..3644410 (-)	690	WP_217898730.1	phosphoribosyltransferase family protein	Machinery gene
F5K02_RS18130 (F5K02_18295)	-	3644416..3644700 (-)	285	WP_007407481.1	competence protein ComFB	-
F5K02_RS18135 (F5K02_18300)	comFA	3644758..3646143 (-)	1386	WP_241457709.1	DEAD/DEAH box helicase	Machinery gene
F5K02_RS18140 (F5K02_18305)	-	3646252..3647100 (-)	849	WP_007407483.1	DegV family protein	-
F5K02_RS18145 (F5K02_18310)	degU	3647198..3647887 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
F5K02_RS18150 (F5K02_18315)	degS	3647964..3649127 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
F5K02_RS18155 (F5K02_18320)	-	3649350..3649997 (+)	648	WP_003151384.1	YigZ family protein	-
F5K02_RS18160 (F5K02_18325)	-	3650002..3651231 (+)	1230	WP_241457710.1	LCP family protein	-
F5K02_RS18165 (F5K02_18330)	-	3651330..3652406 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
F5K02_RS18170 (F5K02_18335)	-	3652539..3653735 (-)	1197	WP_094032536.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=388126 F5K02_RS18150 WP_007407484.1 3647964..3649127(-) (degS) [Bacillus amyloliquefaciens strain ZKY01]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=388126 F5K02_RS18150 WP_007407484.1 3647964..3649127(-) (degS) [Bacillus amyloliquefaciens strain ZKY01]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTCCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951