Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | FOB78_RS00135 | Genome accession | NZ_CP044090 |
| Coordinates | 27121..27612 (+) | Length | 163 a.a. |
| NCBI ID | WP_000609585.1 | Uniprot ID | A0AAV3JH34 |
| Organism | Streptococcus agalactiae strain FDAARGOS_670 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 22121..32612
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB78_RS00110 (FOB78_00110) | - | 22893..23393 (+) | 501 | WP_000446812.1 | phosphatase PAP2 family protein | - |
| FOB78_RS00115 (FOB78_00115) | trxA | 23474..23788 (+) | 315 | WP_001162959.1 | thioredoxin | - |
| FOB78_RS00120 (FOB78_00120) | - | 23834..24427 (-) | 594 | WP_000402394.1 | helix-turn-helix domain-containing protein | - |
| FOB78_RS00125 (FOB78_00125) | mutY | 24604..25758 (-) | 1155 | WP_161512236.1 | A/G-specific adenine glycosylase | - |
| FOB78_RS00130 (FOB78_00130) | rpsF | 26822..27109 (+) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| FOB78_RS00135 (FOB78_00135) | ssbA | 27121..27612 (+) | 492 | WP_000609585.1 | single-stranded DNA-binding protein | Machinery gene |
| FOB78_RS00140 (FOB78_00140) | rpsR | 27657..27896 (+) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| FOB78_RS00145 (FOB78_00145) | - | 28066..29010 (+) | 945 | WP_000812121.1 | magnesium transporter CorA family protein | - |
| FOB78_RS00150 (FOB78_00150) | - | 29035..29706 (+) | 672 | WP_000174846.1 | DUF1129 domain-containing protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18165.81 Da Isoelectric Point: 4.9119
>NTDB_id=387598 FOB78_RS00135 WP_000609585.1 27121..27612(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_670]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=387598 FOB78_RS00135 WP_000609585.1 27121..27612(+) (ssbA) [Streptococcus agalactiae strain FDAARGOS_670]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACGCGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTT
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |