Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOB53_RS11600 | Genome accession | NZ_CP044076 |
| Coordinates | 2261022..2261537 (-) | Length | 171 a.a. |
| NCBI ID | WP_004924506.1 | Uniprot ID | A0A140NIZ6 |
| Organism | Providencia stuartii strain FDAARGOS_645 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2256022..2266537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB53_RS11585 (FOB53_11585) | aarP | 2256036..2256443 (+) | 408 | WP_102780981.1 | HTH-type transcriptional activator AarP | - |
| FOB53_RS11590 (FOB53_11590) | - | 2256926..2258275 (-) | 1350 | WP_102780980.1 | DNA-processing protein DprA | - |
| FOB53_RS11595 (FOB53_11595) | - | 2258272..2260371 (-) | 2100 | WP_004924500.1 | RecQ family ATP-dependent DNA helicase | - |
| FOB53_RS11600 (FOB53_11600) | ssb | 2261022..2261537 (-) | 516 | WP_004924506.1 | single-stranded DNA-binding protein | Machinery gene |
| FOB53_RS11605 (FOB53_11605) | uvrA | 2261927..2264761 (+) | 2835 | WP_150376035.1 | excinuclease ABC subunit UvrA | - |
| FOB53_RS22570 (FOB53_11610) | - | 2265011..2265121 (+) | 111 | WP_369127398.1 | transposase domain-containing protein | - |
| FOB53_RS11615 (FOB53_11615) | - | 2265404..2265673 (+) | 270 | WP_223854616.1 | hypothetical protein | - |
| FOB53_RS11620 (FOB53_11620) | - | 2265752..2266015 (+) | 264 | WP_004924521.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FOB53_RS11625 (FOB53_11625) | - | 2266012..2266299 (+) | 288 | WP_014656874.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18371.35 Da Isoelectric Point: 4.9567
>NTDB_id=387491 FOB53_RS11600 WP_004924506.1 2261022..2261537(-) (ssb) [Providencia stuartii strain FDAARGOS_645]
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
MASRGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTEWHRVVIFGKLAEVAGEYLKKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNIGGSMQMLGGRGGESSGQSQGGQSGWGQPQQPAAQQFSGGGAPARSPAPAPQSSE
PPMDFDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=387491 FOB53_RS11600 WP_004924506.1 2261022..2261537(-) (ssb) [Providencia stuartii strain FDAARGOS_645]
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGCGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGCGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCACCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTAGGGCAAGATCCTGAAATCCGTTACATGCCTAACGG
TGGTGCTGTTGCAAACCTGACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACTGGTGAAATGCGTGAGAAAACAG
AATGGCATCGTGTCGTGATTTTCGGCAAATTAGCTGAAGTTGCTGGTGAATATCTGAAAAAAGGTTCTCAAGTCTATATT
GAAGGTTCTTTGCAGACTCGCAAATGGCAAGACCAAAGTGGTCAAGACCGTTACACCACTGAAGTTGTGGTTAACATCGG
TGGCTCAATGCAAATGTTAGGCGGTCGTGGCGGCGAATCATCAGGCCAAAGCCAAGGTGGTCAAAGCGGTTGGGGTCAGC
CTCAGCAACCAGCGGCTCAGCAATTCAGTGGCGGCGGCGCCCCAGCGCGTTCACCAGCACCTGCACCACAAAGCAGCGAA
CCACCAATGGACTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
70.33 |
100 |
0.749 |
| ssb | Glaesserella parasuis strain SC1401 |
57.065 |
100 |
0.614 |
| ssb | Neisseria gonorrhoeae MS11 |
48.603 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
47.514 |
100 |
0.503 |