Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F3C69_RS02780 | Genome accession | NZ_CP043999 |
| Coordinates | 573846..574355 (-) | Length | 169 a.a. |
| NCBI ID | WP_158360812.1 | Uniprot ID | - |
| Organism | Buchnera aphidicola (Aphis craccivore) isolate Ash | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 568846..579355
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3C69_RS02760 (F3C69_02765) | - | 569445..571031 (-) | 1587 | WP_180818836.1 | peptide chain release factor 3 | - |
| F3C69_RS02765 (F3C69_02770) | ansA | 571239..572252 (+) | 1014 | WP_180818837.1 | asparaginase | - |
| F3C69_RS02770 (F3C69_02775) | - | 572300..572875 (-) | 576 | WP_158360810.1 | NfuA family Fe-S biogenesis protein | - |
| F3C69_RS02775 (F3C69_02780) | bioH | 573011..573787 (+) | 777 | WP_180818838.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| F3C69_RS02780 (F3C69_02785) | ssb | 573846..574355 (-) | 510 | WP_158360812.1 | single-stranded DNA-binding protein | Machinery gene |
| F3C69_RS02785 (F3C69_02790) | dnaB | 574998..576395 (+) | 1398 | WP_158360813.1 | replicative DNA helicase | - |
| F3C69_RS02790 (F3C69_02795) | gshB | 576528..577487 (+) | 960 | WP_158360814.1 | glutathione synthase | - |
| F3C69_RS02795 (F3C69_02800) | ruvX | 577502..577912 (+) | 411 | WP_158360815.1 | Holliday junction resolvase RuvX | - |
| F3C69_RS02800 (F3C69_02805) | - | 577939..578616 (+) | 678 | WP_158360816.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 169 a.a. Molecular weight: 19253.67 Da Isoelectric Point: 6.7365
>NTDB_id=386947 F3C69_RS02780 WP_158360812.1 573846..574355(-) (ssb) [Buchnera aphidicola (Aphis craccivore) isolate Ash]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGETKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNSNHLSINENNSILKTKKTETIDTSKNIEKYKLKKEQMDSSE
IDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGETKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNSNHLSINENNSILKTKKTETIDTSKNIEKYKLKKEQMDSSE
IDFDDEIPF
Nucleotide
Download Length: 510 bp
>NTDB_id=386947 F3C69_RS02780 WP_158360812.1 573846..574355(-) (ssb) [Buchnera aphidicola (Aphis craccivore) isolate Ash]
ATGGCAAGTCGAGGTGTCAATAAAGTAATTTTAATTGGTCATTTAGGTCAAGATCCAGAAGTACGATATATGCCAAATGG
TAATGCAGTAGTAAATATGACGCTTGCAACTTCAGAAAATTGGAAAGATAAAAATACAGGTGAAACTAAAGAGAAAACAG
AATGGCATAGAGTAGTTTTATTTGGAAAGTTAGCTGAAATAGCTGGAGAATATTTACGAAAAGGTTCTCAGGTATATATT
GAAGGTTCGCTTCAAACAAGAAAGTGGCAAGACCAAAATGGTTTAGAACGATATACAACAGAAGTTATAGTAAATATTGG
TGGTACAATGCAAATGCTTGGAAACCGAAATTCTAATTCTAATCATCTTTCTATTAATGAAAATAATAGTATTTTAAAAA
CAAAAAAAACAGAAACTATTGATACATCTAAGAATATAGAAAAATATAAATTAAAAAAGGAACAAATGGATTCTTCAGAA
ATAGATTTTGATGATGAAATTCCATTTTAA
ATGGCAAGTCGAGGTGTCAATAAAGTAATTTTAATTGGTCATTTAGGTCAAGATCCAGAAGTACGATATATGCCAAATGG
TAATGCAGTAGTAAATATGACGCTTGCAACTTCAGAAAATTGGAAAGATAAAAATACAGGTGAAACTAAAGAGAAAACAG
AATGGCATAGAGTAGTTTTATTTGGAAAGTTAGCTGAAATAGCTGGAGAATATTTACGAAAAGGTTCTCAGGTATATATT
GAAGGTTCGCTTCAAACAAGAAAGTGGCAAGACCAAAATGGTTTAGAACGATATACAACAGAAGTTATAGTAAATATTGG
TGGTACAATGCAAATGCTTGGAAACCGAAATTCTAATTCTAATCATCTTTCTATTAATGAAAATAATAGTATTTTAAAAA
CAAAAAAAACAGAAACTATTGATACATCTAAGAATATAGAAAAATATAAATTAAAAAAGGAACAAATGGATTCTTCAGAA
ATAGATTTTGATGATGAAATTCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.497 |
100 |
0.592 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.45 |
| ssb | Neisseria meningitidis MC58 |
43.182 |
100 |
0.45 |
| ssb | Glaesserella parasuis strain SC1401 |
62.281 |
67.456 |
0.42 |