Detailed information NTG0386513

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AT571_RS05005
• Genome accession: NZ_CP043910
• Coordinates: 1064409..1065467 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain AB043
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1059409..1070467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AT571_RS04980 (AT571_04980)	aroK	1059679..1060248 (-)	570	WP_000643712.1	shikimate kinase AroK	-
AT571_RS04985 (AT571_04985)	pilQ	1060260..1062425 (-)	2166	WP_001017031.1	type IV pilus secretin PilQ	Machinery gene
AT571_RS04990 (AT571_04990)	pilP	1062493..1063020 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AT571_RS04995 (AT571_04995)	pilO	1063031..1063771 (-)	741	WP_000076102.1	type 4a pilus biogenesis protein PilO	Machinery gene
AT571_RS05000 (AT571_05000)	pilN	1063768..1064409 (-)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
AT571_RS05005 (AT571_05005)	pilM	1064409..1065467 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AT571_RS05010 (AT571_05010)	ponA	1065630..1068185 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
AT571_RS05015 (AT571_05015)	-	1068203..1069027 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
AT571_RS05020 (AT571_05020)	-	1069030..1069362 (-)	333	WP_000169602.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=386513 AT571_RS05005 WP_002014066.1 1064409..1065467(-) (pilM) [Acinetobacter baumannii strain AB043]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=386513 AT571_RS05005 WP_002014066.1 1064409..1065467(-) (pilM) [Acinetobacter baumannii strain AB043]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGACGCGGTAGT
TCAGCAGGCGGCGCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCATTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423