Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   F2A31_RS14815 Genome accession   NZ_CP043909
Coordinates   3183927..3185057 (+) Length   376 a.a.
NCBI ID   WP_150027296.1    Uniprot ID   A0A5P1UV92
Organism   Acinetobacter suaedae strain C16S1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3178927..3190057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F2A31_RS14795 (F2A31_14795) - 3179480..3181576 (-) 2097 WP_150027288.1 TonB-dependent copper receptor -
  F2A31_RS14800 (F2A31_14800) - 3181649..3182086 (-) 438 WP_150027290.1 DUF2946 family protein -
  F2A31_RS14805 (F2A31_14805) def 3182107..3182637 (-) 531 WP_150027292.1 peptide deformylase -
  F2A31_RS14810 (F2A31_14810) tsaP 3182764..3183915 (+) 1152 WP_150027294.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  F2A31_RS14815 (F2A31_14815) dprA 3183927..3185057 (+) 1131 WP_150027296.1 DNA-processing protein DprA Machinery gene
  F2A31_RS14820 (F2A31_14820) - 3185094..3185663 (+) 570 WP_150027298.1 Sua5/YciO/YrdC/YwlC family protein -
  F2A31_RS14825 (F2A31_14825) - 3186040..3186960 (-) 921 WP_150027300.1 DMT family transporter -
  F2A31_RS14830 (F2A31_14830) - 3187063..3187710 (-) 648 WP_150027301.1 TetR/AcrR family transcriptional regulator -
  F2A31_RS14835 (F2A31_14835) - 3187857..3189080 (+) 1224 WP_150027303.1 MFS transporter -
  F2A31_RS14840 (F2A31_14840) - 3189092..3189865 (+) 774 WP_150027305.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41979.82 Da        Isoelectric Point: 6.9091

>NTDB_id=386492 F2A31_RS14815 WP_150027296.1 3183927..3185057(+) (dprA) [Acinetobacter suaedae strain C16S1]
MLNQLLPHHYPVVLVWYLVQHSLSSFQKIVDYFGDCEQATQTNRFSEWQQLGLHANHLKRLADFQTSEGQLQFTQLVKLI
CQHSDFILTPQDIGYPTQLLPYPDRPPILFGQGNPHALLQPQIAMVGSRKPSPHGRQVAYDFAYYLSEKGFYISSGLAHG
IDHAAHQGGLAHQRTIAVVGTGLDRVYPTQHVQLAQQIAQSGAVISEFLPSTMPLQQHFPRRNRIVSGLSLGVVVVEAAI
KSGSLITANQAANQGKMVFAIPGHIYSEYHQGCHQLIREGAILVDHPDQVIEDLALPTQWQSKQQPSEKSPTTTPSLPPH
LVGLYQCLDWVGQDIDQLSQQQQNNIAELTSQLMELELLGLCTQQGGRYLRCRPML

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=386492 F2A31_RS14815 WP_150027296.1 3183927..3185057(+) (dprA) [Acinetobacter suaedae strain C16S1]
ATGTTGAATCAATTATTACCACACCACTACCCAGTCGTACTGGTGTGGTATTTGGTTCAACATTCGCTTTCCAGTTTTCA
AAAAATTGTCGACTATTTTGGCGATTGCGAACAAGCAACCCAAACCAACCGTTTTTCTGAATGGCAACAATTGGGCTTAC
ATGCCAATCATTTAAAACGTTTGGCTGATTTTCAAACATCCGAAGGACAACTACAGTTTACACAATTGGTAAAACTGATC
TGCCAACATAGTGATTTCATTTTAACCCCTCAAGATATTGGCTATCCGACACAGCTTCTCCCCTATCCAGATCGTCCTCC
AATACTGTTTGGACAAGGGAATCCGCACGCTTTATTGCAACCACAAATTGCAATGGTGGGGAGTCGTAAGCCTAGCCCAC
ACGGACGACAAGTCGCTTATGATTTTGCGTATTATTTAAGTGAAAAAGGTTTTTATATTAGTAGTGGTCTAGCACATGGT
ATAGATCATGCAGCTCATCAAGGTGGATTAGCTCACCAACGAACCATTGCTGTTGTAGGGACTGGATTAGACCGTGTCTA
TCCAACTCAACATGTACAGCTAGCCCAGCAAATTGCACAGTCGGGTGCTGTCATCTCTGAGTTCCTTCCCTCCACTATGC
CTTTACAGCAACATTTTCCTCGCCGTAACCGGATTGTCAGTGGTTTAAGTCTTGGTGTAGTTGTGGTTGAAGCCGCAATC
AAAAGCGGTTCCCTCATTACTGCCAATCAAGCAGCGAACCAAGGGAAAATGGTATTCGCAATTCCTGGACATATCTATAG
TGAATATCATCAAGGCTGTCACCAACTCATTCGAGAAGGTGCAATTTTAGTCGACCACCCAGACCAAGTAATTGAAGATT
TAGCCTTACCCACCCAGTGGCAATCCAAACAGCAGCCATCAGAAAAGTCCCCAACTACCACTCCAAGTCTTCCTCCACAC
TTGGTTGGGCTATATCAGTGTTTAGACTGGGTTGGACAAGACATAGATCAACTGTCGCAACAACAGCAAAATAATATTGC
TGAGCTTACCTCACAACTCATGGAGCTTGAATTATTAGGTTTATGCACACAACAAGGCGGACGCTATTTACGTTGCCGTC
CAATGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5P1UV92

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

71.733

99.734

0.715

  dprA Acinetobacter baumannii strain A118

71.2

99.734

0.71

  dprA Acinetobacter baylyi ADP1

67.368

100

0.681


Multiple sequence alignment