Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   F2A31_RS14810 Genome accession   NZ_CP043909
Coordinates   3182764..3183915 (+) Length   383 a.a.
NCBI ID   WP_150027294.1    Uniprot ID   A0A5P1UX85
Organism   Acinetobacter suaedae strain C16S1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3177764..3188915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F2A31_RS14790 (F2A31_14790) - 3178678..3179436 (+) 759 WP_150027286.1 hypothetical protein -
  F2A31_RS14795 (F2A31_14795) - 3179480..3181576 (-) 2097 WP_150027288.1 TonB-dependent copper receptor -
  F2A31_RS14800 (F2A31_14800) - 3181649..3182086 (-) 438 WP_150027290.1 DUF2946 family protein -
  F2A31_RS14805 (F2A31_14805) def 3182107..3182637 (-) 531 WP_150027292.1 peptide deformylase -
  F2A31_RS14810 (F2A31_14810) tsaP 3182764..3183915 (+) 1152 WP_150027294.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  F2A31_RS14815 (F2A31_14815) dprA 3183927..3185057 (+) 1131 WP_150027296.1 DNA-processing protein DprA Machinery gene
  F2A31_RS14820 (F2A31_14820) - 3185094..3185663 (+) 570 WP_150027298.1 Sua5/YciO/YrdC/YwlC family protein -
  F2A31_RS14825 (F2A31_14825) - 3186040..3186960 (-) 921 WP_150027300.1 DMT family transporter -
  F2A31_RS14830 (F2A31_14830) - 3187063..3187710 (-) 648 WP_150027301.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 41884.02 Da        Isoelectric Point: 9.5437

>NTDB_id=386491 F2A31_RS14810 WP_150027294.1 3182764..3183915(+) (tsaP) [Acinetobacter suaedae strain C16S1]
MKKVLNGIQSFHALGLKKQLIAAAICAGLGMNANLAHAASPNVSPPSVKVGAPHVYVVKKGDTLWDISGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDRLLLCSLNGKPLVGKDEGDGCAGIIRRYTGNTSTLRPQVRVEALNNSIPVIPLTHIQQWLER
TTILPADAITHTPYILGTADQRVLAGKGQRVYVRGNGIENGQRYGIFREGEPYTILDEHGKKQILGIELTQVASGVTISN
EKDITTVELTDSYNGEVRRGDRVMPEHDAMLPTLFYPTDANQVKDGGKIIRVMGSIGTAAKNGVVTVDRGTADGIEIGQV
FNAYQDGETVKDPKTKENVKLPGQYVGSVMVFKSFDRISYAYVLESELPIKVGSSIKPPRLDN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=386491 F2A31_RS14810 WP_150027294.1 3182764..3183915(+) (tsaP) [Acinetobacter suaedae strain C16S1]
ATGAAAAAGGTTTTAAACGGCATACAATCATTTCATGCCTTGGGGTTAAAAAAACAACTGATTGCCGCTGCAATTTGTGC
AGGACTGGGCATGAATGCCAATCTTGCACATGCTGCAAGCCCAAACGTTAGCCCACCTTCAGTAAAAGTGGGTGCACCAC
ATGTTTATGTGGTCAAAAAAGGCGATACACTTTGGGATATTTCAGGTAAGTTTTTAAGCAAACCTTGGCGTTGGCCTGAG
ATTTGGGCAAGCAATAAGCACGTTAAAAACCCACATTGGATCTATCCCGGCGATCGCTTACTGCTTTGTAGTCTGAACGG
TAAGCCATTGGTGGGCAAAGATGAGGGAGATGGCTGTGCGGGTATTATTCGTCGTTATACAGGCAACACTTCAACATTAC
GCCCACAGGTGCGTGTCGAAGCACTCAACAATAGCATTCCAGTTATTCCATTAACCCATATTCAGCAATGGCTCGAACGG
ACAACCATTCTTCCAGCTGATGCCATTACACATACCCCATACATTCTCGGCACTGCTGATCAAAGAGTACTTGCTGGCAA
AGGTCAACGCGTATATGTTCGTGGTAATGGTATCGAGAATGGTCAACGCTATGGTATTTTCCGTGAAGGGGAACCTTACA
CCATTCTTGATGAGCATGGTAAAAAGCAAATTCTTGGCATTGAATTGACCCAAGTTGCTTCAGGTGTGACCATTAGCAAT
GAAAAGGATATTACAACCGTCGAACTCACCGATAGTTATAATGGTGAAGTCCGTCGTGGCGATCGTGTCATGCCAGAACA
CGACGCTATGTTACCAACATTATTCTACCCAACCGATGCAAACCAAGTTAAAGATGGCGGTAAAATCATCCGTGTCATGG
GTTCAATTGGCACAGCCGCTAAAAATGGTGTTGTCACTGTTGATCGTGGCACAGCTGATGGGATTGAAATCGGACAAGTA
TTTAATGCTTATCAAGACGGCGAAACGGTTAAAGACCCTAAGACCAAAGAAAATGTCAAACTACCAGGGCAATATGTCGG
CAGTGTGATGGTCTTTAAGAGCTTTGACCGTATCAGCTATGCCTATGTACTTGAAAGTGAGTTACCAATTAAGGTGGGCT
CAAGTATCAAACCACCTCGTTTAGATAACTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(56-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P1UX85

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

72.917

100

0.731

Multiple sequence alignment