Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | F2A31_RS01460 | Genome accession | NZ_CP043909 |
| Coordinates | 311096..311593 (+) | Length | 165 a.a. |
| NCBI ID | WP_150024873.1 | Uniprot ID | A0A5P1UNZ5 |
| Organism | Acinetobacter suaedae strain C16S1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 306096..316593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F2A31_RS01450 (F2A31_01450) | - | 306271..307059 (+) | 789 | WP_150024871.1 | pilus assembly protein PilX | - |
| F2A31_RS01455 (F2A31_01455) | - | 307076..311086 (+) | 4011 | WP_150024872.1 | pilus assembly protein | - |
| F2A31_RS01460 (F2A31_01460) | comE | 311096..311593 (+) | 498 | WP_150024873.1 | type IV pilin protein | Machinery gene |
| F2A31_RS01465 (F2A31_01465) | - | 311587..312045 (+) | 459 | WP_150024874.1 | type IV pilin protein | - |
| F2A31_RS01470 (F2A31_01470) | - | 312323..313015 (+) | 693 | WP_228715638.1 | Tfp pilus assembly protein FimT/FimU | - |
| F2A31_RS01475 (F2A31_01475) | pilV | 313012..313500 (+) | 489 | WP_150024875.1 | type IV pilus modification protein PilV | Machinery gene |
| F2A31_RS01480 (F2A31_01480) | - | 313502..314596 (+) | 1095 | WP_228715639.1 | PilW family protein | - |
| F2A31_RS01485 (F2A31_01485) | pilX | 314599..315333 (+) | 735 | WP_150024876.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17970.32 Da Isoelectric Point: 7.8189
>NTDB_id=386461 F2A31_RS01460 WP_150024873.1 311096..311593(+) (comE) [Acinetobacter suaedae strain C16S1]
MQNSRLTSVHGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKTRNFNYLGFPSTVVLPVG
ATGSAVQYTITVSDGADVSKSLTDSTASGQSWVMQGIWKTSETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
MQNSRLTSVHGFTLVELMIVVVIVAIFAAIAIPSYQEYVRRAIAAQAQQEMQRISTELERSKTRNFNYLGFPSTVVLPVG
ATGSAVQYTITVSDGADVSKSLTDSTASGQSWVMQGIWKTSETTNVDNFSFLMTSSGVRCKNKTKANITATNVDNATCGT
GREEW
Nucleotide
Download Length: 498 bp
>NTDB_id=386461 F2A31_RS01460 WP_150024873.1 311096..311593(+) (comE) [Acinetobacter suaedae strain C16S1]
ATGCAAAATAGTCGATTAACATCTGTACATGGATTTACTTTGGTTGAGTTGATGATCGTTGTGGTTATTGTTGCAATTTT
TGCGGCAATTGCGATACCGAGCTATCAAGAATATGTTCGACGTGCGATTGCTGCACAGGCTCAACAGGAAATGCAGCGTA
TATCAACTGAATTAGAGAGAAGTAAAACAAGAAACTTCAACTATTTGGGGTTCCCGAGTACGGTTGTTTTGCCTGTTGGT
GCAACAGGTTCAGCGGTTCAATATACGATTACTGTAAGTGATGGAGCAGATGTCAGTAAATCGTTAACAGATAGTACTGC
ATCAGGACAAAGTTGGGTGATGCAGGGTATTTGGAAAACATCAGAAACAACAAATGTTGATAACTTCAGTTTTTTGATGA
CCAGTTCTGGAGTACGCTGTAAGAATAAAACCAAAGCGAATATTACTGCGACTAATGTAGATAATGCGACATGTGGAACA
GGGCGAGAAGAATGGTAA
ATGCAAAATAGTCGATTAACATCTGTACATGGATTTACTTTGGTTGAGTTGATGATCGTTGTGGTTATTGTTGCAATTTT
TGCGGCAATTGCGATACCGAGCTATCAAGAATATGTTCGACGTGCGATTGCTGCACAGGCTCAACAGGAAATGCAGCGTA
TATCAACTGAATTAGAGAGAAGTAAAACAAGAAACTTCAACTATTTGGGGTTCCCGAGTACGGTTGTTTTGCCTGTTGGT
GCAACAGGTTCAGCGGTTCAATATACGATTACTGTAAGTGATGGAGCAGATGTCAGTAAATCGTTAACAGATAGTACTGC
ATCAGGACAAAGTTGGGTGATGCAGGGTATTTGGAAAACATCAGAAACAACAAATGTTGATAACTTCAGTTTTTTGATGA
CCAGTTCTGGAGTACGCTGTAAGAATAAAACCAAAGCGAATATTACTGCGACTAATGTAGATAATGCGACATGTGGAACA
GGGCGAGAAGAATGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
43.243 |
100 |
0.485 |
| pilY2 | Acinetobacter baumannii D1279779 |
43.636 |
100 |
0.436 |