Detailed information NTG0038622

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: NMBB_RS06350
• Genome accession: NC_017505
• Coordinates: 1167123..1168154 (+)
• Length: 343 a.a.
• NCBI ID: WP_002213493.1
• Uniprot ID: -
• Organism: Neisseria meningitidis alpha710
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1162123..1173154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMBB_RS06330 (NMBB_1325)	-	1163020..1163394 (-)	375	WP_014575377.1	arsenate reductase	-
NMBB_RS06335 (NMBB_1326)	-	1163544..1165172 (+)	1629	WP_014582436.1	ABC-F family ATPase	-
NMBB_RS06340 (NMBB_1327)	-	1165257..1166510 (+)	1254	WP_002219239.1	multifunctional CCA addition/repair protein	-
NMBB_RS06345 (NMBB_1328)	-	1166733..1167041 (+)	309	WP_002219238.1	hypothetical protein	-
NMBB_RS06350 (NMBB_1330)	ruvB	1167123..1168154 (+)	1032	WP_002213493.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NMBB_RS06355 (NMBB_1331)	rpe	1168177..1168905 (-)	729	WP_002219237.1	ribulose-phosphate 3-epimerase	-
NMBB_RS06360 (NMBB_1332)	-	1169051..1169485 (+)	435	WP_002213489.1	Spy/CpxP family protein refolding chaperone	-
NMBB_RS06365 (NMBB_1333)	-	1169498..1170361 (-)	864	WP_002217136.1	ATP-binding protein	-
NMBB_RS14890 (NMBB_1334)	-	1170369..1170986 (-)	618	WP_002217135.1	riboflavin synthase	-
NMBB_RS14895 (NMBB_1335)	-	1171149..1171763 (-)	615	WP_014575380.1	molybdenum cofactor guanylyltransferase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37682.18 Da
• Isoelectric Point: 5.2966

>NTDB_id=38622 NMBB_RS06350 WP_002213493.1 1167123..1168154(+) (ruvB) [Neisseria meningitidis alpha710]
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQHKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=38622 NMBB_RS06350 WP_002213493.1 1167123..1168154(+) (ruvB) [Neisseria meningitidis alpha710]
ATGCTGCAAACCGACAACCTGACTGCCGCTCAACCGCAACGCATTGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTATATCGGGCAGCATAAAGCCAAAGAACAGCTCGCCATTTTCA
TCCAAGCCGCCAAAAAGCGCGGCGAAGCACTCGACCACGTCTTGCTTTTCGGTCCGCCCGGGCTGGGTAAAACCACACTG
GCGCACATCATCGCCAAAGAATTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCCGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGACGTATTGTTTATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTACCCCGCGCTTGAAGACTACCGGCTCGACATTATGATAGGCGAAGGGCCCGCCGCCCGTTCCGTTAAAATCGAC
CTGCCGCCCTTCACGCTCATCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ATGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.856	95.335	0.58
ruvB	Streptococcus pneumoniae TIGR4	63.057	91.545	0.577
ruvB	Streptococcus pneumoniae R6	63.057	91.545	0.577
ruvB	Streptococcus pneumoniae D39	63.057	91.545	0.577
ruvB	Helicobacter pylori 26695	57.508	91.254	0.525
ruvB	Synechocystis sp. PCC 6803	54.573	95.627	0.522