Detailed information NTG0384915

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: F0H32_RS15700
• Genome accession: NZ_CP043540
• Coordinates: 3650475..3651533 (-)
• Length: 352 a.a.
• NCBI ID: WP_003471536.1
• Uniprot ID: A0A109HJ64
• Organism: Xanthomonas translucens pv. undulosa strain LW16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3645475..3656533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0H32_RS15680 (F0H32_15680)	-	3646624..3648525 (-)	1902	WP_058362766.1	type IV pilus secretin PilQ family protein	-
F0H32_RS15685 (F0H32_15685)	-	3648546..3649085 (-)	540	WP_003471528.1	pilus assembly protein PilP	-
F0H32_RS15690 (F0H32_15690)	-	3649082..3649756 (-)	675	WP_003471530.1	type 4a pilus biogenesis protein PilO	-
F0H32_RS15695 (F0H32_15695)	-	3649753..3650475 (-)	723	WP_003471534.1	PilN domain-containing protein	-
F0H32_RS15700 (F0H32_15700)	pilM	3650475..3651533 (-)	1059	WP_003471536.1	pilus assembly protein PilM	Machinery gene
F0H32_RS15705 (F0H32_15705)	-	3651750..3654179 (+)	2430	WP_003471537.1	penicillin-binding protein 1A	-
F0H32_RS15710 (F0H32_15710)	-	3654371..3655018 (+)	648	WP_003471539.1	hypothetical protein	-
F0H32_RS15715 (F0H32_15715)	-	3655057..3655251 (-)	195	WP_139116005.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37699.39 Da
• Isoelectric Point: 4.4880

>NTDB_id=384915 F0H32_RS15700 WP_003471536.1 3650475..3651533(-) (pilM) [Xanthomonas translucens pv. undulosa strain LW16]
MGLIPKSQQPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVTRSGTRARHAAAA
VAGSAVITKLIPMPAELDESELEAQVELEAVNYIPYPIEEVNLDFEVLGIIPNNPEMVQVLLAASRSENVELRQSALELG
GLIAKVMDVEAFAVENAFAMVASELPVAADGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGMAKRQGGLPESYAIEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAALAGLPEMVEEQLGVATVVANPLA
QMTLGPKVQAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=384915 F0H32_RS15700 WP_003471536.1 3650475..3651533(-) (pilM) [Xanthomonas translucens pv. undulosa strain LW16]
GTGGGGCTTATCCCAAAGAGTCAGCAACCGCTGATCGGTGTCGATATCAGTTCGACTGCGGTCAAACTGTTGCAGCTGTC
GCGTAGCGGCAATCGGTTCCGCGTAGAGCACTATGCCGTGGAACCCCTGCCGCCCAACGCCGTGGTCGAGAAGAACATCG
TCGAGGTCGAAGCCGTGGGCGAGGCGATCCGCCGCGCCGTGACCCGTTCCGGTACCCGCGCCAGGCATGCCGCGGCGGCG
GTGGCCGGCTCGGCGGTGATCACCAAGCTGATCCCGATGCCGGCCGAACTGGACGAGAGCGAACTGGAAGCGCAGGTCGA
GTTGGAGGCGGTCAACTACATCCCGTATCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGCTGGGGATCATCCCCAACA
ATCCGGAGATGGTGCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTCGAGCTGCGCCAGTCGGCGCTGGAGCTCGGC
GGCTTGATCGCCAAGGTCATGGACGTGGAGGCCTTCGCGGTCGAGAACGCGTTCGCGATGGTTGCCAGCGAGTTGCCGGT
GGCCGCCGACGGCGTGGTCGCCCTGGTCGATATCGGCGCCACCATGACCACGCTCAACGTGCTGCGCGGCGGGCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGCGGCAAGCAGCTGACCGACGAAGTGATGCGCCGCTACGGCCTGACCTACGAGGAA
GCCGGCATGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGCGATCGAGGTGCTGGAGCCGTTCAAGGAGGCGACGGT
GCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTACGCCGGCAGCGAATTCAACCGGGTCGACCACATCGTGCTGGCCGGCG
GTTGCGCGGCGCTGGCCGGGTTGCCGGAGATGGTCGAGGAACAACTGGGGGTGGCGACCGTGGTCGCCAACCCGCTGGCG
CAGATGACCCTGGGGCCGAAGGTCCAGGCGCATGCGCTGGCGCAGGACGCGCCGGCGCTGATGATCGCCACCGGCCTGGC
TCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A109HJ64

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	50.852	100	0.509
comM	Acinetobacter baylyi ADP1	50	99.432	0.497
pilM	Legionella pneumophila strain ERS1305867	46.286	99.432	0.46