Detailed information NTG0384420

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: FZ025_RS13255
• Genome accession: NZ_CP043476
• Coordinates: 3023117..3024175 (+)
• Length: 352 a.a.
• NCBI ID: WP_104558193.1
• Uniprot ID: A0A2S7F000
• Organism: Xanthomonas hyacinthi strain CFBP 1156
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3018117..3029175

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FZ025_RS13235 (FZ025_13310)	-	3018874..3019275 (-)	402	WP_146093510.1	hypothetical protein	-
FZ025_RS13240 (FZ025_13315)	-	3019247..3019615 (+)	369	WP_146093511.1	hypothetical protein	-
FZ025_RS13245 (FZ025_13320)	-	3019627..3020274 (-)	648	WP_046977670.1	hypothetical protein	-
FZ025_RS13250 (FZ025_13325)	-	3020467..3022899 (-)	2433	WP_104558191.1	penicillin-binding protein 1A	-
FZ025_RS13255 (FZ025_13330)	pilM	3023117..3024175 (+)	1059	WP_104558193.1	pilus assembly protein PilM	Machinery gene
FZ025_RS13260 (FZ025_13335)	-	3024175..3024948 (+)	774	WP_046977667.1	PilN domain-containing protein	-
FZ025_RS13265 (FZ025_13340)	pilO	3024945..3025619 (+)	675	WP_046977666.1	type 4a pilus biogenesis protein PilO	-
FZ025_RS13270 (FZ025_13345)	-	3025625..3026155 (+)	531	WP_046977673.1	pilus assembly protein PilP	-
FZ025_RS13275 (FZ025_13350)	-	3026176..3028047 (+)	1872	WP_046977665.1	type IV pilus secretin PilQ family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37738.37 Da
• Isoelectric Point: 4.4501

>NTDB_id=384420 FZ025_RS13255 WP_104558193.1 3023117..3024175(+) (pilM) [Xanthomonas hyacinthi strain CFBP 1156]
MGLIPKSQQPLIGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVTRSGTRAKHAAAA
VAGSAVITKLIPMPAELDENELEAQVELEAVNYIPYPIDEVNLDFEVLGIIPNNPEMVQVLLAASRSENVELRQSALELG
GLVARVMDVEAFAVENAFALVASELPVAADGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEVMRRYGLTYEE
AGMAKRQGGLPESYEIEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAALAGLPEMVEEQLGVATVVANPLA
QMTLGPKVQAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=384420 FZ025_RS13255 WP_104558193.1 3023117..3024175(+) (pilM) [Xanthomonas hyacinthi strain CFBP 1156]
GTGGGGCTTATCCCAAAGAGTCAGCAACCGCTGATCGGTGTCGATATCAGTTCGACCGCGGTCAAGCTGTTGCAGCTGTC
GCGTAGCGGCAACCGGTTCCGCGTAGAGCACTACGCCGTGGAACCCCTGCCGCCCAACGCCGTGGTCGAGAAGAACATCG
TCGAGGTCGAAGCCGTGGGCGAAGCGATTCGCCGCGCCGTGACCCGTTCCGGCACCCGCGCCAAGCATGCCGCGGCGGCG
GTGGCCGGTTCGGCGGTGATCACCAAGCTGATCCCGATGCCGGCCGAACTCGACGAGAACGAGCTGGAAGCGCAGGTCGA
GCTGGAGGCGGTCAACTACATCCCGTACCCGATCGACGAAGTGAATCTGGACTTCGAGGTGCTGGGGATCATCCCCAACA
ACCCGGAGATGGTGCAGGTGCTGCTGGCCGCGTCGCGCTCGGAGAACGTCGAGCTGCGCCAGTCGGCGCTGGAACTCGGC
GGCCTGGTCGCCAGGGTCATGGACGTGGAGGCCTTCGCGGTCGAGAACGCGTTCGCGCTGGTGGCCAGCGAGCTGCCGGT
GGCGGCCGATGGCGTCGTCGCCCTGGTCGATATCGGCGCCACCATGACCACGCTCAACGTGCTGCGCGGCGGGCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGCGGCAAGCAGCTGACCGACGAAGTGATGCGCCGCTACGGCCTGACCTACGAGGAA
GCCGGCATGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGAGATCGAGGTGCTGGAGCCGTTCAAGGAGGCGACGGT
GCAGCAGATCAGTCGCCTGCTGCAGTTCTTCTACGCCGGCAGCGAATTCAACCGGGTCGACCACATCGTGCTGGCCGGCG
GTTGCGCGGCGCTGGCCGGGCTGCCGGAGATGGTCGAGGAACAACTGGGGGTGGCGACCGTGGTCGCCAACCCGCTGGCG
CAGATGACCCTGGGGCCGAAGGTCCAGGCGCACGCGCTGGCCCAGGACGCGCCGGCGCTGATGATCGCCACCGGCCTGGC
TCTGCGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A2S7F000

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.42	100	0.514
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	99.432	0.497
pilM	Legionella pneumophila strain ERS1305867	46.857	99.432	0.466