Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   HF085_RS09975 Genome accession   NZ_CP051479
Coordinates   2013228..2014028 (-) Length   266 a.a.
NCBI ID   WP_044033815.1    Uniprot ID   A0A2K4ANM7
Organism   Staphylococcus aureus strain NGA76     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2008228..2019028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HF085_RS09960 (HF085_00135) - 2009672..2009794 (-) 123 Protein_1932 IS3 family transposase -
  HF085_RS09965 (HF085_00130) rlmH 2009835..2010314 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HF085_RS09970 (HF085_00125) adsA 2010682..2013000 (-) 2319 WP_000645782.1 LPXTG-anchored adenosine synthase AdsA -
  HF085_RS09975 (HF085_00120) vicX 2013228..2014028 (-) 801 WP_044033815.1 MBL fold metallo-hydrolase Regulator
  HF085_RS09980 (HF085_00115) yycI 2014417..2015205 (-) 789 WP_001104167.1 two-component system regulatory protein YycI -
  HF085_RS09985 (HF085_00110) yycH 2015206..2016540 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  HF085_RS09990 (HF085_00105) walK 2016533..2018359 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=384108 HF085_RS09975 WP_044033815.1 2013228..2014028(-) (vicX) [Staphylococcus aureus strain NGA76]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQILN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=384108 HF085_RS09975 WP_044033815.1 2013228..2014028(-) (vicX) [Staphylococcus aureus strain NGA76]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCACGTATGAGTGTTGGCCAAATATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K4ANM7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment