Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   FY406_RS04910 Genome accession   NZ_CP043405
Coordinates   1003408..1004667 (+) Length   419 a.a.
NCBI ID   WP_003086487.1    Uniprot ID   -
Organism   Streptococcus ratti strain ATCC 31377     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 998408..1009667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS04880 (FY406_04880) - 998721..999437 (+) 717 WP_003086498.1 YebC/PmpR family DNA-binding transcriptional regulator -
  FY406_RS04885 (FY406_04885) - 999630..999974 (+) 345 WP_003086495.1 thioredoxin domain-containing protein -
  FY406_RS04890 (FY406_04890) yajC 1000082..1000447 (+) 366 WP_003086494.1 preprotein translocase subunit YajC -
  FY406_RS04895 (FY406_04895) - 1000580..1001695 (+) 1116 WP_003086492.1 ISAs1 family transposase -
  FY406_RS04900 (FY406_04900) - 1001831..1002580 (+) 750 WP_003086491.1 isoprenyl transferase -
  FY406_RS04905 (FY406_04905) - 1002595..1003389 (+) 795 WP_003086489.1 phosphatidate cytidylyltransferase -
  FY406_RS04910 (FY406_04910) eeP 1003408..1004667 (+) 1260 WP_003086487.1 RIP metalloprotease RseP Regulator
  FY406_RS04915 (FY406_04915) - 1004695..1006545 (+) 1851 WP_003086485.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46038.92 Da        Isoelectric Point: 8.9494

>NTDB_id=383581 FY406_RS04910 WP_003086487.1 1003408..1004667(+) (eeP) [Streptococcus ratti strain ATCC 31377]
MSGLIAFIIIFGIIVLVHEFGHFYFARRSGILVREFAIGMGPKIFAHQGKDGTAYTLRMLPLGGYVRMAGWGDDTTEIKT
GTPAALTLNDKGVVVRINLSDRQLDKTALPMNVTAYDLENRLEITGRVLDETRTYPVDHDATIVEEDGTEIRIAPLDVQY
QNTSIWGRLITNFAGPMNNFILGVVVFMLVIFLQGGVPDYYSNHVRVVPDGAVAKLGVKDNDQILQIGKSKVDNWEDLTE
AVAESTTDLGKGETIPFKVKTKSGIEVLRVRPRKVNGSYVIGVMPSLKTGFADKIVGAFKISWDRAFAILNALKGIVLQP
SLNKLGGPVAIYQMSNMAAKEGAIRVLELMGMLSLNLGIFNLIPIPALDGGKILINLIEAIRRKPLKQETETYITLAGVL
VMVALMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=383581 FY406_RS04910 WP_003086487.1 1003408..1004667(+) (eeP) [Streptococcus ratti strain ATCC 31377]
ATGTCAGGATTAATTGCATTTATCATTATTTTTGGAATTATAGTACTTGTCCATGAATTTGGGCATTTCTATTTTGCCAG
AAGATCTGGAATTTTAGTCCGAGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACATCAAGGCAAGGACGGTACAG
CCTATACCCTTCGCATGCTGCCCTTGGGAGGCTATGTGCGTATGGCAGGCTGGGGGGATGATACAACCGAAATTAAAACG
GGAACACCTGCCGCTTTAACCCTTAACGATAAGGGGGTTGTGGTTCGTATCAATCTTTCTGACAGACAGTTAGACAAAAC
GGCACTGCCCATGAATGTCACCGCCTATGATTTAGAAAACAGGCTGGAAATTACCGGCCGTGTTTTGGATGAGACTAGGA
CGTATCCGGTTGACCATGATGCAACTATTGTCGAAGAAGACGGTACGGAAATCAGAATTGCGCCTTTGGATGTCCAATAT
CAAAATACCAGTATTTGGGGACGTTTGATTACTAATTTTGCGGGGCCGATGAATAATTTCATCTTAGGAGTCGTTGTGTT
TATGCTTGTCATTTTCTTACAAGGCGGTGTTCCGGATTATTACAGCAATCACGTTCGTGTAGTGCCTGATGGCGCCGTTG
CAAAATTGGGTGTCAAAGATAACGATCAGATTCTTCAAATCGGAAAAAGTAAAGTTGATAATTGGGAAGATCTGACCGAG
GCAGTGGCTGAATCAACTACTGATTTAGGCAAGGGTGAAACGATCCCCTTTAAGGTTAAAACTAAATCAGGCATTGAAGT
ACTGCGAGTTCGTCCAAGAAAAGTCAACGGCAGTTACGTTATTGGTGTTATGCCAAGTTTAAAGACAGGCTTTGCTGATA
AGATAGTCGGTGCTTTTAAAATATCTTGGGACAGAGCCTTTGCTATACTGAATGCCTTAAAAGGTATTGTACTTCAGCCC
AGCCTTAACAAGTTGGGTGGGCCAGTAGCGATTTATCAGATGAGCAATATGGCAGCTAAAGAGGGTGCTATTCGTGTCTT
AGAACTGATGGGGATGCTCTCTCTCAATTTAGGTATTTTTAATCTGATTCCTATTCCGGCCCTTGATGGCGGCAAAATTT
TAATTAATTTAATCGAAGCCATCAGGAGAAAGCCTCTCAAGCAGGAAACAGAAACGTACATTACACTCGCTGGTGTTCTG
GTAATGGTCGCATTGATGATTGCCGTAACGTGGAATGATATTATGCGAGCCTTTTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

67.857

100

0.68

  eeP Streptococcus thermophilus LMD-9

67.619

100

0.678


Multiple sequence alignment