Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FY044_RS01290 | Genome accession | NZ_CP043397 |
| Coordinates | 278119..278649 (+) | Length | 176 a.a. |
| NCBI ID | WP_032615999.1 | Uniprot ID | A0A3E1ZQY9 |
| Organism | Leclercia adecarboxylata strain L21 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 273119..283649
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FY044_RS01270 (FY044_01290) | aphA | 273445..274158 (+) | 714 | WP_164539794.1 | acid phosphatase AphA | - |
| FY044_RS01275 (FY044_01295) | - | 274270..274686 (+) | 417 | WP_032615993.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| FY044_RS01280 (FY044_01300) | - | 274689..275042 (+) | 354 | WP_032615995.1 | MmcQ/YjbR family DNA-binding protein | - |
| FY044_RS01285 (FY044_01305) | uvrA | 275043..277868 (-) | 2826 | WP_164539795.1 | excinuclease ABC subunit UvrA | - |
| FY044_RS01290 (FY044_01310) | ssb | 278119..278649 (+) | 531 | WP_032615999.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| FY044_RS01295 (FY044_01315) | - | 278747..279028 (-) | 282 | WP_032616001.1 | YjcB family protein | - |
| FY044_RS01300 (FY044_01320) | - | 279639..280967 (+) | 1329 | WP_223263968.1 | GGDEF domain-containing protein | - |
| FY044_RS01305 (FY044_01325) | - | 281306..282892 (+) | 1587 | WP_059308943.1 | EAL domain-containing protein | - |
| FY044_RS01310 (FY044_01330) | soxS | 282889..283215 (-) | 327 | WP_032616007.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18849.87 Da Isoelectric Point: 5.2456
>NTDB_id=383325 FY044_RS01290 WP_032615999.1 278119..278649(+) (ssb) [Leclercia adecarboxylata strain L21]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=383325 FY044_RS01290 WP_032615999.1 278119..278649(+) (ssb) [Leclercia adecarboxylata strain L21]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.243 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.684 |
100 |
0.602 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |