Detailed information NTG0038290

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SP670_RS06645
• Genome accession: NC_014498
• Coordinates: 1262410..1263363 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495921.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae 670-6B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1257410..1268363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP670_RS13530	-	1257896..1257991 (-)	96	Protein_1278	IS630 family transposase	-
SP670_RS06625 (SP670_1338)	-	1258406..1258747 (+)	342	Protein_1279	transposase	-
SP670_RS06630 (SP670_1339)	prsA	1258866..1259807 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
SP670_RS06635 (SP670_1340)	-	1259874..1260587 (-)	714	WP_000230399.1	O-methyltransferase	-
SP670_RS06640 (SP670_1341)	pepF	1260589..1262391 (-)	1803	WP_000244145.1	oligoendopeptidase F	Regulator
SP670_RS06645 (SP670_1342)	coiA	1262410..1263363 (-)	954	WP_000495921.1	competence protein CoiA	Machinery gene
SP670_RS06650 (SP670_1343)	tehB	1263436..1264296 (-)	861	WP_000413761.1	SAM-dependent methyltransferase TehB	-
SP670_RS06655 (SP670_1344)	smpB	1264312..1264779 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
SP670_RS06660 (SP670_1345)	rnr	1264742..1267096 (-)	2355	WP_000654878.1	ribonuclease R	-
SP670_RS06665 (SP670_1346)	secG	1267198..1267431 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SP670_RS06670	rpmG	1267471..1267620 (-)	150	WP_001809104.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38339.01 Da
• Isoelectric Point: 9.1156

>NTDB_id=38290 SP670_RS06645 WP_000495921.1 1262410..1263363(-) (coiA) [Streptococcus pneumoniae 670-6B]
MFVARDTRGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKEFLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=38290 SP670_RS06645 WP_000495921.1 1262410..1263363(-) (coiA) [Streptococcus pneumoniae 670-6B]
ATGTTTGTTGCGAGAGATACTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATTCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATTCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.107	100	0.981
coiA	Streptococcus pneumoniae Rx1	97.476	100	0.975
coiA	Streptococcus pneumoniae D39	97.476	100	0.975
coiA	Streptococcus pneumoniae R6	97.476	100	0.975
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432