Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   FYN22_RS15420 Genome accession   NZ_CP043307
Coordinates   3180642..3181775 (+) Length   377 a.a.
NCBI ID   WP_148826927.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain Acsw19     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3175642..3186775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FYN22_RS15400 (FYN22_15400) - 3176145..3178211 (-) 2067 WP_148826924.1 TonB-dependent copper receptor -
  FYN22_RS15405 (FYN22_15405) - 3178282..3178719 (-) 438 WP_148826925.1 DUF2946 family protein -
  FYN22_RS15410 (FYN22_15410) def 3178811..3179344 (-) 534 WP_004684452.1 peptide deformylase -
  FYN22_RS15415 (FYN22_15415) tsaP 3179465..3180619 (+) 1155 WP_148826926.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FYN22_RS15420 (FYN22_15420) dprA 3180642..3181775 (+) 1134 WP_148826927.1 DNA-processing protein DprA Machinery gene
  FYN22_RS15425 (FYN22_15425) - 3181821..3182390 (+) 570 WP_148826928.1 L-threonylcarbamoyladenylate synthase -
  FYN22_RS15430 (FYN22_15430) - 3182790..3183710 (-) 921 WP_087013942.1 DMT family transporter -
  FYN22_RS15435 (FYN22_15435) - 3184046..3184600 (+) 555 WP_148826929.1 hypothetical protein -
  FYN22_RS15440 (FYN22_15440) - 3184725..3185270 (+) 546 WP_004984048.1 glutathione peroxidase -
  FYN22_RS15445 (FYN22_15445) - 3185470..3185844 (+) 375 WP_058868684.1 RcnB family protein -
  FYN22_RS15450 (FYN22_15450) - 3185977..3186567 (+) 591 WP_148826930.1 hypothetical protein -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41720.45 Da        Isoelectric Point: 6.6816

>NTDB_id=382786 FYN22_RS15420 WP_148826927.1 3180642..3181775(+) (dprA) [Acinetobacter johnsonii strain Acsw19]
MLNSLSHEQIATITLWYLVQHSLSSFQKLQQHFGTSTKAVAASNLQIWPSLGLHKSHLQRVIEIQTPAGQIKLQTLLHDI
QASCDFILLDTESHYPSQLLPYADRPPILFGQGNPQSLLQPQVAIVGSRKPSPHGKQVAYDFAYYLAEKGFYICSGLAEG
IDAAAHQGGLKYQRTIAVMGTGLNLTYPSQHQALRTQILENNGCIITEFLPHTPPLQHNFPRRNRIVSALSLGVVVAEAA
LKSGSLGTAQRAAEQGKIIFAIPGHIYSEHHQGCHQLIREGAILVDHPEQIIEDLALPTQWHSQSQSQETTPSASIEIPS
DLLELYNQLDWVGQNMDQLNFKLNIDIATLTSQLMELEILGLAQQQAGNYLRCRSSQ

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=382786 FYN22_RS15420 WP_148826927.1 3180642..3181775(+) (dprA) [Acinetobacter johnsonii strain Acsw19]
ATGCTGAACTCTTTATCACATGAACAGATTGCAACAATCACCCTGTGGTATTTGGTTCAGCATTCTTTATCGAGCTTTCA
AAAACTACAGCAGCATTTTGGCACAAGCACAAAAGCTGTTGCTGCCTCCAATCTTCAGATCTGGCCAAGTCTCGGCTTAC
ACAAAAGCCATTTACAACGTGTCATAGAAATTCAAACACCTGCTGGCCAAATCAAATTACAAACTTTACTGCATGACATC
CAAGCCAGCTGTGATTTTATTTTACTTGATACTGAAAGTCATTATCCCTCGCAACTGCTGCCCTATGCTGACCGGCCACC
GATTTTATTTGGTCAGGGTAATCCACAAAGCCTATTACAACCTCAAGTTGCTATCGTCGGCAGTCGAAAACCCAGTCCAC
ACGGCAAACAAGTGGCTTATGACTTTGCCTATTACCTCGCCGAAAAAGGCTTTTATATTTGCAGTGGTTTAGCTGAAGGC
ATTGATGCTGCGGCGCATCAGGGCGGCTTAAAATATCAACGTACCATTGCAGTGATGGGCACAGGCTTAAATCTCACTTA
CCCTTCCCAACATCAAGCCCTGCGTACGCAAATATTAGAAAATAATGGCTGTATTATTACTGAATTTTTACCACATACAC
CGCCTTTACAGCATAATTTTCCACGGCGGAACCGCATCGTCAGTGCATTGAGTTTAGGGGTTGTGGTTGCAGAAGCCGCA
CTCAAAAGTGGCTCTCTAGGAACCGCCCAAAGAGCTGCAGAACAAGGGAAAATCATTTTTGCGATTCCCGGTCATATTTA
CAGCGAACACCATCAAGGTTGTCATCAACTGATCCGAGAAGGGGCGATTTTGGTCGATCATCCTGAGCAAATCATTGAAG
ACTTGGCACTCCCCACTCAATGGCATAGCCAATCCCAGTCACAAGAAACCACCCCAAGTGCTAGTATTGAGATCCCATCT
GATTTACTCGAACTTTATAATCAACTGGATTGGGTTGGACAAAATATGGATCAACTTAATTTCAAACTTAACATCGATAT
TGCCACACTCACTAGCCAGTTAATGGAACTGGAGATTTTAGGACTCGCACAACAACAGGCTGGCAATTATCTGCGTTGCC
GTTCAAGCCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

66.223

99.735

0.66

  dprA Acinetobacter baumannii D1279779

65.16

99.735

0.65

  dprA Acinetobacter baylyi ADP1

60.892

100

0.615


Multiple sequence alignment