Detailed information NTG0382779

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: FYN22_RS14650
• Genome accession: NZ_CP043307
• Coordinates: 3019296..3020156 (+)
• Length: 286 a.a.
• NCBI ID: WP_148826862.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain Acsw19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3014296..3025156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYN22_RS14630 (FYN22_14630)	secG	3014913..3015242 (-)	330	WP_004692710.1	preprotein translocase subunit SecG	-
FYN22_RS14635 (FYN22_14635)	tpiA	3015256..3016047 (-)	792	WP_010325769.1	triose-phosphate isomerase	-
FYN22_RS14640 (FYN22_14640)	pilB	3016327..3018039 (+)	1713	WP_148826861.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FYN22_RS14645 (FYN22_14645)	pilC	3018070..3019296 (+)	1227	WP_010325767.1	type II secretion system F family protein	Machinery gene
FYN22_RS14650 (FYN22_14650)	pilD	3019296..3020156 (+)	861	WP_148826862.1	prepilin peptidase	Machinery gene
FYN22_RS14655 (FYN22_14655)	coaE	3020163..3020762 (+)	600	WP_148826863.1	dephospho-CoA kinase	-
FYN22_RS14660 (FYN22_14660)	-	3020776..3021693 (-)	918	WP_148826864.1	DMT family transporter	-
FYN22_RS14665 (FYN22_14665)	rlmB	3021726..3022475 (-)	750	WP_004692717.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
FYN22_RS14670 (FYN22_14670)	-	3022618..3022941 (-)	324	WP_004692718.1	pyrimidine/purine nucleoside phosphorylase	-
FYN22_RS14675 (FYN22_14675)	recN	3023334..3024995 (+)	1662	WP_148826865.1	DNA repair protein RecN	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32002.38 Da
• Isoelectric Point: 8.0620

>NTDB_id=382779 FYN22_RS14650 WP_148826862.1 3019296..3020156(+) (pilD) [Acinetobacter johnsonii strain Acsw19]
MQEIISYLINTPMALYFAVGVFSLCIGSFLNVVIYRTPKMMEQEWRTDCQLLLHPEQPIIDETKLTLSKPASTCPKCKSA
IHWYQNIPVMSWFLLRGKCGTCHNPISIRYPAIELLTTICALAVVAVFGPTIQMLFGLVLTYILITLTFIDFDTQLLPDR
YTLTLAGLGLGVNSYAIYTTPTAAIWGYIIGFLCLWIVYYLFKLITGKEGMGYGDFKLLAALGAWMGPLLLPLIVLLSSF
VGAIIGIILLKVRKENQPFAFGPYIAIAGWIAFLWGEQIMKIYLGN

Nucleotide

• Length: 861 bp

>NTDB_id=382779 FYN22_RS14650 WP_148826862.1 3019296..3020156(+) (pilD) [Acinetobacter johnsonii strain Acsw19]
ATGCAAGAAATAATTTCCTATCTTATCAATACTCCAATGGCGCTTTATTTCGCCGTTGGAGTTTTTAGTTTGTGCATTGG
TAGTTTCCTGAATGTAGTGATCTATCGCACGCCAAAAATGATGGAACAAGAATGGCGCACCGACTGCCAACTTCTGCTTC
ATCCTGAGCAGCCAATTATTGATGAAACAAAGCTCACGTTGAGTAAGCCTGCCTCAACCTGTCCAAAATGCAAAAGTGCC
ATACACTGGTATCAAAATATCCCTGTGATGAGTTGGTTCCTGCTACGAGGAAAGTGTGGCACTTGCCATAATCCGATCAG
CATTCGCTACCCTGCGATTGAACTCCTGACCACCATTTGTGCTTTGGCCGTGGTTGCTGTCTTTGGCCCAACAATCCAAA
TGCTGTTCGGTCTCGTACTCACTTACATTTTAATCACCTTAACTTTTATTGATTTTGACACTCAACTTTTACCTGATCGC
TATACCCTCACCCTTGCAGGTCTGGGTTTAGGGGTCAATAGTTATGCGATTTACACCACACCGACAGCGGCCATTTGGGG
TTACATCATTGGTTTCTTATGCTTATGGATTGTCTACTATCTGTTTAAGCTCATCACAGGCAAGGAAGGTATGGGTTATG
GTGACTTTAAGTTACTTGCTGCTTTAGGCGCATGGATGGGTCCTTTGCTACTACCACTGATTGTGCTACTTTCTTCTTTC
GTAGGCGCCATTATCGGCATCATCCTGCTCAAAGTCCGTAAAGAAAATCAGCCTTTTGCTTTTGGTCCGTATATTGCCAT
CGCAGGATGGATTGCCTTTTTGTGGGGTGAGCAAATTATGAAAATATACTTAGGCAATTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	78.596	99.65	0.783
pilD	Acinetobacter nosocomialis M2	78.596	99.65	0.783
pilD	Vibrio cholerae strain A1552	52.985	93.706	0.497
pilD	Vibrio campbellii strain DS40M4	50.936	93.357	0.476
pilD	Neisseria gonorrhoeae MS11	45.788	95.455	0.437