Detailed information NTG0381741

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: HC362_RS22250
• Genome accession: NZ_CP050693
• Coordinates: 5085858..5087141 (+)
• Length: 427 a.a.
• NCBI ID: WP_209263157.1
• Uniprot ID: A0ABS3WMH8
• Organism: Streptomyces sp. 891-h
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5080858..5092141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HC362_RS22220 (HC362_22135)	-	5081770..5081964 (+)	195	WP_243085759.1	hypothetical protein	-
HC362_RS22235 (HC362_22150)	tig	5082552..5083982 (+)	1431	WP_243085760.1	trigger factor	-
HC362_RS22240 (HC362_22155)	clpP	5084347..5084952 (+)	606	WP_209238803.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HC362_RS22245 (HC362_22160)	clpP	5085023..5085682 (+)	660	WP_209263156.1	ATP-dependent Clp protease proteolytic subunit	Regulator
HC362_RS22250 (HC362_22165)	clpX	5085858..5087141 (+)	1284	WP_209263157.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
HC362_RS22255 (HC362_22170)	-	5087214..5088005 (-)	792	WP_243085761.1	hypothetical protein	-
HC362_RS22260 (HC362_22175)	-	5088013..5088930 (-)	918	WP_243085762.1	hypothetical protein	-
HC362_RS22265 (HC362_22180)	-	5089137..5090201 (-)	1065	WP_243085763.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46907.54 Da
• Isoelectric Point: 4.7404

>NTDB_id=381741 HC362_RS22250 WP_209263157.1 5085858..5087141(+) (clpX) [Streptomyces sp. 891-h]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWDELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGQGRDDGIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFAGLEKIIESRAGAKGIGFGADIRSKREIEATNQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILMEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVERVVITED
VVHSNVNPTLVPRARGNGEQQRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=381741 HC362_RS22250 WP_209263157.1 5085858..5087141(+) (clpX) [Streptomyces sp. 891-h]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCAGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATTGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTGCGCTGGGACGAGCTGCCCAAGCCCCGGGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCGGTGGCCGTCTACAACCACTACAAGCGGGTGCAGGCCGGTGAGAACGGCCAGGGCAGGGACGA
CGGCATCGAGCTGTCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGATCGGGCAAGACGCTGCTGGCCCAGACGCTCG
CCCGGATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTCACCGAGGCGGGGTATGTCGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGACGAGAT
CGACAAGGTGGCCCGCAAGAGCGAGAACCCCTCGATCACCCGGGACGTCTCCGGCGAGGGTGTGCAGCAGGCGCTGCTGA
AGATCCTGGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACCACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGGCTGGAGAAGATCATCGAGTCCCGCGCCGGCGCCAAGGG
CATCGGCTTCGGCGCCGACATCCGCTCCAAGCGGGAGATCGAGGCGACCAACCAGTTCGAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGGCGGCTCCCGGTCATCACCTCCGTGCACAACCTGGACCGCGAGGCG
CTGCTGCAGATCCTCATGGAGCCCAGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGTCGAGCT
GGACTTCGACCGGCCCGCGCTGGAGGCCATCGCCGACCAGGCCATTCTGCGCGGCACCGGAGCCCGCGGTCTGCGCGCCA
TCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCCTCGCGCAAGGACGTCGAGCGCGTGGTGATCACCGAGGAC
GTCGTGCACTCCAATGTGAACCCGACCCTGGTGCCGCGTGCCCGCGGCAACGGCGAGCAGCAGCGCCACGAGAAGAGCGC
CTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.25	93.677	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.012	95.785	0.527