Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   FXO17_RS17995 Genome accession   NZ_CP043052
Coordinates   3737216..3738349 (+) Length   377 a.a.
NCBI ID   WP_068525560.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP43     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3732216..3743349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FXO17_RS17970 (FXO17_17970) - 3732472..3732678 (-) 207 WP_002114054.1 hypothetical protein -
  FXO17_RS17975 (FXO17_17975) oprC 3732732..3734846 (-) 2115 WP_002114079.1 TonB-dependent copper receptor -
  FXO17_RS17980 (FXO17_17980) - 3734919..3735344 (-) 426 WP_002114087.1 DUF2946 family protein -
  FXO17_RS17985 (FXO17_17985) def 3735388..3735918 (-) 531 WP_002114101.1 peptide deformylase -
  FXO17_RS17990 (FXO17_17990) tsaP 3736041..3737195 (+) 1155 WP_002114134.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FXO17_RS17995 (FXO17_17995) dprA 3737216..3738349 (+) 1134 WP_068525560.1 DNA-processing protein DprA Machinery gene
  FXO17_RS18000 (FXO17_18000) yrdC 3738401..3738970 (+) 570 WP_002114056.1 L-threonylcarbamoyladenylate synthase -
  FXO17_RS18005 (FXO17_18005) - 3739363..3740283 (-) 921 WP_002114137.1 DMT family transporter -
  FXO17_RS18010 (FXO17_18010) - 3740387..3741040 (-) 654 WP_078210243.1 TetR/AcrR family transcriptional regulator -
  FXO17_RS18015 (FXO17_18015) nepI 3741176..3742390 (+) 1215 WP_002114107.1 MFS transporter -
  FXO17_RS18020 (FXO17_18020) yeaM 3742412..3743176 (+) 765 WP_002114047.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41980.58 Da        Isoelectric Point: 6.7197

>NTDB_id=380400 FXO17_RS17995 WP_068525560.1 3737216..3738349(+) (dprA) [Acinetobacter pittii strain AP43]
MLTQLYSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAELSQWRNLGLHANHLKRVDEFQTAQGQAQFKKLTEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLNSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=380400 FXO17_RS17995 WP_068525560.1 3737216..3738349(+) (dprA) [Acinetobacter pittii strain AP43]
ATGCTTACTCAACTTTATTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGAATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTAAAAAACTAACTGAGCAAATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGTCAGGCACAAGCCCTATTACAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGG
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAAACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAGTTTTTGCCTGGGACAC
CTCCACTACAACAGCATTTCCCACGTAGAAACCGAATTGTTAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.186

100

0.902

  dprA Acinetobacter baumannii strain A118

89.655

100

0.897

  dprA Acinetobacter baylyi ADP1

70.604

100

0.714

  dprA Vibrio cholerae strain A1552

43.228

92.042

0.398


Multiple sequence alignment