Detailed information NTG0380121

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: FXN58_RS03955
• Genome accession: NZ_CP043003
• Coordinates: 747788..748906 (+)
• Length: 372 a.a.
• NCBI ID: WP_148324180.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain HK_907
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 742788..753906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FXN58_RS03930 (FXN58_03925)	lexA	745395..746018 (+)	624	WP_148324171.1	transcriptional repressor LexA	-
FXN58_RS03935 (FXN58_03930)	rpsF	746170..746547 (+)	378	WP_148324174.1	30S ribosomal protein S6	-
FXN58_RS03940 (FXN58_03935)	priB	746534..746860 (+)	327	WP_005544874.1	primosomal replication protein N	-
FXN58_RS03945 (FXN58_03940)	rpsR	746873..747103 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
FXN58_RS03950 (FXN58_03945)	rplI	747119..747568 (+)	450	WP_148324177.1	50S ribosomal protein L9	-
FXN58_RS03955 (FXN58_03950)	dprA	747788..748906 (+)	1119	WP_148324180.1	DNA-processing protein DprA	Machinery gene
FXN58_RS03960 (FXN58_03955)	glpQ	748963..750045 (-)	1083	WP_148324183.1	glycerophosphodiester phosphodiesterase	-
FXN58_RS03965 (FXN58_03960)	glpT	750277..751719 (-)	1443	WP_148324186.1	glycerol-3-phosphate transporter	-
FXN58_RS03970 (FXN58_03965)	rlmB	752052..752789 (-)	738	WP_148324189.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41676.98 Da
• Isoelectric Point: 6.5728

>NTDB_id=380121 FXN58_RS03955 WP_148324180.1 747788..748906(+) (dprA) [Aggregatibacter actinomycetemcomitans strain HK_907]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSVLSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHRKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQVTWKKRSQNRPHFPAIKKSTSVALPPPVTPS
HPELYNIIGYNPISADDLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=380121 FXN58_RS03955 WP_148324180.1 747788..748906(+) (dprA) [Aggregatibacter actinomycetemcomitans strain HK_907]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCACCGCCGGTATTATTCGTCAAAGGCGCGACAAGTGT
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGTCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAACGGTTTCATCATTACCAGCGGGTTGGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCGCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAACAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGCCAGTTTAGCCAAGGTTGTCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAGTGACATGGAAAA
AACGCTCGCAAAATCGACCGCACTTTCCCGCTATAAAGAAATCAACATCCGTCGCATTACCGCCTCCCGTCACGCCATCC
CATCCCGAGCTATACAATATTATCGGCTATAATCCGATAAGCGCAGATGACTTATCGACGACACTTAATCTGTCTATTGA
TCAAATCCTTATTCAATTGTTGGAGCTGGAATTACAGGATTTAATTATCAGTGAAAACGGATTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (312-365)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.83	100	0.645
dprA	Glaesserella parasuis strain SC1401	55.398	94.624	0.524
dprA	Vibrio campbellii strain DS40M4	42.588	99.731	0.425
dprA	Vibrio cholerae strain A1552	42.133	100	0.425
dprA	Legionella pneumophila strain ERS1305867	40.27	99.462	0.401