Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FTX45_RS01410 | Genome accession | NZ_CP042930 |
| Coordinates | 297804..298334 (+) | Length | 176 a.a. |
| NCBI ID | WP_032615999.1 | Uniprot ID | A0A3E1ZQY9 |
| Organism | Leclercia adecarboxylata strain J656 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 292804..303334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTX45_RS01390 (FTX45_01390) | aphA | 293130..293843 (+) | 714 | WP_150870086.1 | acid phosphatase AphA | - |
| FTX45_RS01395 (FTX45_01395) | - | 293955..294371 (+) | 417 | WP_032615993.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| FTX45_RS01400 (FTX45_01400) | - | 294374..294727 (+) | 354 | WP_032615995.1 | MmcQ/YjbR family DNA-binding protein | - |
| FTX45_RS01405 (FTX45_01405) | uvrA | 294728..297553 (-) | 2826 | WP_032615997.1 | excinuclease ABC subunit UvrA | - |
| FTX45_RS01410 (FTX45_01410) | ssb | 297804..298334 (+) | 531 | WP_032615999.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| FTX45_RS01415 (FTX45_01415) | - | 298432..298713 (-) | 282 | WP_032616001.1 | YjcB family protein | - |
| FTX45_RS01420 (FTX45_01420) | - | 299324..300652 (+) | 1329 | WP_225321531.1 | sensor domain-containing diguanylate cyclase | - |
| FTX45_RS01425 (FTX45_01425) | - | 300991..302577 (+) | 1587 | WP_032616005.1 | EAL domain-containing protein | - |
| FTX45_RS01430 (FTX45_01430) | soxS | 302574..302900 (-) | 327 | WP_039031951.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18849.87 Da Isoelectric Point: 5.2456
>NTDB_id=379460 FTX45_RS01410 WP_032615999.1 297804..298334(+) (ssb) [Leclercia adecarboxylata strain J656]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=379460 FTX45_RS01410 WP_032615999.1 297804..298334(+) (ssb) [Leclercia adecarboxylata strain J656]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCGTCTGCACCA
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.243 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.684 |
100 |
0.602 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |