Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   FR761_RS02165 Genome accession   NZ_CP042556
Coordinates   471649..472785 (-) Length   378 a.a.
NCBI ID   WP_000957666.1    Uniprot ID   A0A062IFS2
Organism   Acinetobacter baumannii strain E47     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 466649..477785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FR761_RS02140 (FR761_02140) - 466829..467594 (-) 766 Protein_405 AraC family transcriptional regulator -
  FR761_RS02145 (FR761_02145) - 467616..468830 (-) 1215 WP_000372840.1 MFS transporter -
  FR761_RS02150 (FR761_02150) - 468967..469617 (+) 651 WP_012300783.1 TetR/AcrR family transcriptional regulator -
  FR761_RS02155 (FR761_02155) - 469723..470643 (+) 921 WP_001994180.1 DMT family transporter -
  FR761_RS02160 (FR761_02160) - 471035..471604 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  FR761_RS02165 (FR761_02165) dprA 471649..472785 (-) 1137 WP_000957666.1 DNA-processing protein DprA Machinery gene
  FR761_RS02170 (FR761_02170) tsaP 472806..473960 (-) 1155 WP_000755273.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  FR761_RS02175 (FR761_02175) def 474083..474613 (+) 531 WP_001196539.1 peptide deformylase -
  FR761_RS02180 (FR761_02180) - 474650..475078 (+) 429 WP_000231981.1 DUF2946 family protein -
  FR761_RS02185 (FR761_02185) - 475151..475471 (+) 321 Protein_414 TonB-dependent copper receptor -
  FR761_RS02190 (FR761_02190) - 475473..475967 (-) 495 WP_001003818.1 IS630 family transposase -
  FR761_RS02195 (FR761_02195) - 476015..476320 (-) 306 WP_000122230.1 IS630 transposase-related protein -

Sequence


Protein


Download         Length: 378 a.a.        Molecular weight: 42132.72 Da        Isoelectric Point: 6.4547

>NTDB_id=378398 FR761_RS02165 WP_000957666.1 471649..472785(-) (dprA) [Acinetobacter baumannii strain E47]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRSLY

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=378398 FR761_RS02165 WP_000957666.1 471649..472785(-) (dprA) [Acinetobacter baumannii strain E47]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGCGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATTCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAGGCTAATACGAATACTCCAGAAATTCCT
GAGCATCTGATTGACCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTTGTATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062IFS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

98.138

99.471

0.976

  dprA Acinetobacter baumannii strain A118

97.872

99.471

0.974

  dprA Acinetobacter baylyi ADP1

70.496

100

0.714

  dprA Vibrio cholerae strain A1552

43.202

87.566

0.378


Multiple sequence alignment