Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FR773_RS01260 | Genome accession | NZ_CP042505 |
| Coordinates | 270305..270835 (+) | Length | 176 a.a. |
| NCBI ID | WP_032615999.1 | Uniprot ID | A0A3E1ZQY9 |
| Organism | Leclercia adecarboxylata strain E1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 265305..275835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR773_RS01240 (FR773_01240) | aphA | 265631..266344 (+) | 714 | WP_150870086.1 | acid phosphatase AphA | - |
| FR773_RS01245 (FR773_01245) | - | 266456..266872 (+) | 417 | WP_032615993.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| FR773_RS01250 (FR773_01250) | - | 266875..267228 (+) | 354 | WP_032615995.1 | MmcQ/YjbR family DNA-binding protein | - |
| FR773_RS01255 (FR773_01255) | uvrA | 267229..270054 (-) | 2826 | WP_117386864.1 | excinuclease ABC subunit UvrA | - |
| FR773_RS01260 (FR773_01260) | ssb | 270305..270835 (+) | 531 | WP_032615999.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| FR773_RS01265 (FR773_01265) | - | 270933..271214 (-) | 282 | WP_032616001.1 | YjcB family protein | - |
| FR773_RS01270 (FR773_01270) | - | 271825..273153 (+) | 1329 | WP_223610485.1 | GGDEF domain-containing protein | - |
| FR773_RS01275 (FR773_01275) | - | 273492..275078 (+) | 1587 | WP_032616005.1 | EAL domain-containing protein | - |
| FR773_RS01280 (FR773_01280) | soxS | 275075..275401 (-) | 327 | WP_032616007.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18849.87 Da Isoelectric Point: 5.2456
>NTDB_id=378169 FR773_RS01260 WP_032615999.1 270305..270835(+) (ssb) [Leclercia adecarboxylata strain E1]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQPSAP
AQSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=378169 FR773_RS01260 WP_032615999.1 270305..270835(+) (ssb) [Leclercia adecarboxylata strain E1]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGTTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCCTCTGCACCG
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGG
TGGTGCAGTGGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCCGAAGTGGCCGGTGAATATCTGCGTAAAGGCTCCCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGTAAATGGACCGATCAGTCCGGCGCAGAAAAATACACCACTGAAGTGGTGGTAAACGTCGG
CGGCACCATGCAGATGTTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCTCAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGCCCTCTGCACCG
GCGCAGTCTAACGAACCGCCAATGGATTTCGACGACGATATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.243 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.684 |
100 |
0.602 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |