Detailed information NTG0377718

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: FGL73_RS08090
• Genome accession: NZ_CP042408
• Coordinates: 1681464..1681910 (-)
• Length: 148 a.a.
• NCBI ID: WP_021721872.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain CBA3619
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1676464..1686910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL73_RS08055 (FGL73_08055)	-	1676581..1676958 (-)	378	WP_038602343.1	pyridoxamine 5'-phosphate oxidase family protein	-
FGL73_RS08060 (FGL73_08060)	-	1677163..1678029 (+)	867	WP_098394207.1	RluA family pseudouridine synthase	-
FGL73_RS08065 (FGL73_08065)	-	1678067..1678876 (-)	810	WP_038602349.1	metal ABC transporter permease	-
FGL73_RS08070 (FGL73_08070)	-	1678869..1679606 (-)	738	WP_021723055.1	metal ABC transporter ATP-binding protein	-
FGL73_RS08075 (FGL73_08075)	-	1679784..1680626 (-)	843	WP_038602352.1	metal ABC transporter substrate-binding protein	-
FGL73_RS08080 (FGL73_08080)	-	1680623..1681060 (-)	438	WP_021721874.1	zinc-dependent MarR family transcriptional regulator	-
FGL73_RS08085 (FGL73_08085)	comGG	1681141..1681416 (-)	276	WP_021721873.1	hypothetical protein	Machinery gene
FGL73_RS08090 (FGL73_08090)	comGF	1681464..1681910 (-)	447	WP_021721872.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL73_RS08095 (FGL73_08095)	comGE	1681873..1682169 (-)	297	WP_038602356.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGL73_RS08100 (FGL73_08100)	comGD	1682141..1682572 (-)	432	WP_080651959.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGL73_RS08105 (FGL73_08105)	comGC	1682532..1682915 (-)	384	WP_080739889.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL73_RS08110 (FGL73_08110)	comGB	1682929..1684002 (-)	1074	WP_080739890.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL73_RS08115 (FGL73_08115)	comGA	1683896..1684834 (-)	939	WP_058205111.1	competence type IV pilus ATPase ComGA	Machinery gene

Sequence

Protein

• Length: 148 a.a.
• Molecular weight: 17156.02 Da
• Isoelectric Point: 9.0730

>NTDB_id=377718 FGL73_RS08090 WP_021721872.1 1681464..1681910(-) (comGF) [Lactococcus lactis strain CBA3619]
MERKFCDLNLKVKAFTLLECLVALLAISGSVLVISGLTKMLKEQMAISQSDSIKDWQIFCQQMRFELSGTKLDKVEQNFL
YVTKDKKLRFGFMNDDFRKTDDKGQGYQPMLYDIKGAKIQATKNLITIRIDFNQGGERTFIYQFPEDK

Nucleotide

• Length: 447 bp

>NTDB_id=377718 FGL73_RS08090 WP_021721872.1 1681464..1681910(-) (comGF) [Lactococcus lactis strain CBA3619]
ATGGAAAGGAAATTTTGCGACTTGAACCTCAAAGTTAAAGCATTTACCTTGTTGGAGTGTTTGGTGGCACTTCTTGCAAT
TTCTGGATCAGTCCTTGTCATCTCAGGTTTAACAAAGATGTTGAAAGAACAAATGGCGATTAGTCAAAGTGATAGCATAA
AAGATTGGCAAATTTTCTGTCAGCAAATGCGTTTTGAACTCTCAGGAACAAAATTAGATAAGGTAGAACAGAATTTTCTA
TATGTAACTAAAGATAAAAAACTAAGGTTTGGTTTTATGAATGATGATTTCCGGAAGACTGATGACAAAGGTCAGGGTTA
TCAGCCAATGCTTTATGATATAAAAGGGGCTAAGATTCAAGCTACTAAAAATCTAATAACCATAAGAATTGATTTTAATC
AAGGAGGTGAAAGAACATTTATCTATCAATTTCCAGAAGACAAATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (48-137)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Lactococcus lactis subsp. cremoris KW2	78.014	95.27	0.743
comYF	Streptococcus mutans UA140	48.227	95.27	0.459
comYF	Streptococcus mutans UA159	47.518	95.27	0.453
comGF/cglF	Streptococcus mitis SK321	42.143	94.595	0.399
comGF/cglF	Streptococcus pneumoniae Rx1	40.714	94.595	0.385
comGF/cglF	Streptococcus pneumoniae D39	40.714	94.595	0.385
comGF/cglF	Streptococcus pneumoniae R6	40.714	94.595	0.385
comGF/cglF	Streptococcus pneumoniae TIGR4	40.714	94.595	0.385
comGF/cglF	Streptococcus mitis NCTC 12261	40.714	94.595	0.385