Detailed information NTG0037709

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AOLE_RS20825
• Genome accession: NC_014259
• Coordinates: 3794452..3795312 (+)
• Length: 286 a.a.
• NCBI ID: WP_013199081.1
• Uniprot ID: -
• Organism: Acinetobacter oleivorans DR1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3789452..3800312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOLE_RS17805 (AOLE_17770)	secG	3790058..3790387 (-)	330	WP_004795012.1	preprotein translocase subunit SecG	-
AOLE_RS17810 (AOLE_17775)	tpiA	3790400..3791194 (-)	795	WP_013199077.1	triose-phosphate isomerase	-
AOLE_RS17815 (AOLE_17785)	pilB	3791486..3793198 (+)	1713	WP_023274331.1	type IV-A pilus assembly ATPase PilB	Machinery gene
AOLE_RS17820 (AOLE_17790)	pilC	3793226..3794452 (+)	1227	WP_013199080.1	type II secretion system F family protein	Machinery gene
AOLE_RS20825 (AOLE_17795)	pilD	3794452..3795312 (+)	861	WP_013199081.1	A24 family peptidase	Machinery gene
AOLE_RS17830 (AOLE_17800)	coaE	3795314..3795910 (+)	597	WP_013199082.1	dephospho-CoA kinase	-
AOLE_RS17835 (AOLE_17805)	-	3795907..3796821 (-)	915	WP_013199083.1	DMT family transporter	-
AOLE_RS17840 (AOLE_17810)	rlmB	3796857..3797606 (-)	750	WP_004795029.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
AOLE_RS17845 (AOLE_17815)	-	3797709..3798035 (-)	327	WP_004795031.1	pyrimidine/purine nucleoside phosphorylase	-
AOLE_RS17850 (AOLE_17820)	-	3798112..3799422 (-)	1311	WP_013199084.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32105.54 Da
• Isoelectric Point: 6.8115

>NTDB_id=37709 AOLE_RS20825 WP_013199081.1 3794452..3795312(+) (pilD) [Acinetobacter oleivorans DR1]
MQEIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPKMMEQDWQQECQILLNPEQPIIDHEKLTLSKPASSCPECHQP
IRWYQNIPVISWLVLKGKCGHCQHPISIRYPAVELLTMVCSLVVVMMFGPTIQMLLGLVLTWVLITLTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=37709 AOLE_RS20825 WP_013199081.1 3794452..3795312(+) (pilD) [Acinetobacter oleivorans DR1]
ATGCAAGAAATTATTGCTTATTTTATTCAAAACTTAACTGCACTTTATATTGCAGTTGCATTATTGAGCCTATGTATTGG
TAGCTTTCTGAATGTGGTGATTTATCGCACCCCCAAAATGATGGAACAAGATTGGCAGCAAGAATGTCAAATACTACTCA
ATCCTGAACAACCAATCATTGATCATGAAAAACTGACATTAAGTAAGCCTGCTTCATCATGTCCAGAGTGCCATCAGCCC
ATCCGTTGGTATCAAAATATCCCAGTCATCAGTTGGTTAGTTTTAAAAGGTAAATGTGGTCATTGCCAGCATCCTATTAG
CATTCGCTACCCAGCAGTTGAACTATTAACAATGGTATGTTCACTGGTTGTGGTCATGATGTTTGGTCCAACCATTCAAA
TGCTTTTGGGGCTAGTCCTGACTTGGGTCCTGATTACTCTCACCTTTATAGACTTTGATACTCAGCTGCTACCCGACCGT
TTTACCCTACCTTTGGCTGCGCTTGGTCTAGGCATTAACACCTTTAATATTTACACCTCACCTAACTCAGCCATTTGGGG
TTACCTGATTGGTTTTTTATGTCTTTGGATTGTGTATTACTTATTTAAAGTGATTACAGGCAAAGAAGGCATGGGCTACG
GTGACTTTAAATTACTTGCCGCATTAGGTGCGTGGATGGGGCCATTGATGCTGCCATTAATTGTGTTATTGTCATCTTTA
CTAGGTGCAATTATTGGCATCATTTTATTAAAATTACGCAATGACAATCAGCCCTTTGCCTTTGGGCCCTACATTGCCAT
TGCAGGTTGGGTTGCCTTTCTATGGGGTGATCAGATTATGAAAATCTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	95.804	100	0.958
pilD	Acinetobacter baumannii D1279779	95.455	100	0.955
pilD	Vibrio cholerae strain A1552	52.206	95.105	0.497
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	47.727	92.308	0.441