Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   AOLE_RS01540 Genome accession   NC_014259
Coordinates   330324..330851 (+) Length   175 a.a.
NCBI ID   WP_013196697.1    Uniprot ID   A0AAN0P5G1
Organism   Acinetobacter oleivorans DR1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 325324..335851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS01525 (AOLE_01475) comM 327868..328926 (+) 1059 WP_023274369.1 pilus assembly protein PilM Machinery gene
  AOLE_RS01530 (AOLE_01480) pilN 328926..329567 (+) 642 WP_013196695.1 PilN domain-containing protein Machinery gene
  AOLE_RS01535 (AOLE_01485) pilO 329564..330313 (+) 750 WP_013196696.1 type 4a pilus biogenesis protein PilO Machinery gene
  AOLE_RS01540 (AOLE_01490) pilP 330324..330851 (+) 528 WP_013196697.1 pilus assembly protein PilP Machinery gene
  AOLE_RS01545 (AOLE_01495) pilQ 330914..333079 (+) 2166 WP_013196698.1 type IV pilus secretin PilQ family protein Machinery gene
  AOLE_RS01550 (AOLE_01500) aroK 333091..333660 (+) 570 WP_004789808.1 shikimate kinase AroK -
  AOLE_RS01555 (AOLE_01505) aroB 333689..334771 (+) 1083 WP_013196699.1 3-dehydroquinate synthase -
  AOLE_RS01560 (AOLE_01510) - 334788..335666 (+) 879 WP_005300981.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19323.42 Da        Isoelectric Point: 9.4623

>NTDB_id=37672 AOLE_RS01540 WP_013196697.1 330324..330851(+) (pilP) [Acinetobacter oleivorans DR1]
MKLKQISFSILACLVLVGCDSRIDAVNQQMANIRNQPPQPIDPAPIFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSIRNNRGQVLALIQSPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=37672 AOLE_RS01540 WP_013196697.1 330324..330851(+) (pilP) [Acinetobacter oleivorans DR1]
ATGAAACTTAAGCAAATTTCTTTTTCTATTTTGGCATGTTTAGTTTTAGTTGGATGTGACTCGAGAATTGATGCTGTAAA
TCAGCAAATGGCAAATATACGTAATCAGCCACCACAGCCGATAGATCCAGCACCTATTTTCACGCCTGTGCCACAATTTA
ACTATGCGGCTCATCAGCTAAAGAGTCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCAGGAAAACGG
GTATATCCGAATTTCTCACGTGCACCTCAGCCTCTAGAAAGTTATGCATTAGAATCCTTAAACATGAAAGGAAGCATACG
TAATAACCGTGGGCAAGTATTGGCTCTTATCCAATCACCCGATCAGCAAATTGAACGGGTACAGGTGGGGAATTATATCG
GGATGAACCAAGGGCGTATTACCCATATTGGTCCAACCCAGATTGATCTGGTAGAGATTGTCCCTGATGGGCGCGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

90.857

100

0.909
  comL Acinetobacter baylyi ADP1

70.76

97.714

0.691

Multiple sequence alignment