Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   AOLE_RS01535 Genome accession   NC_014259
Coordinates   329564..330313 (+) Length   249 a.a.
NCBI ID   WP_013196696.1    Uniprot ID   A0AAN0P5I2
Organism   Acinetobacter oleivorans DR1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 324564..335313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOLE_RS01520 (AOLE_01470) ponA 325145..327706 (-) 2562 WP_013196693.1 penicillin-binding protein PBP1a -
  AOLE_RS01525 (AOLE_01475) comM 327868..328926 (+) 1059 WP_023274369.1 pilus assembly protein PilM Machinery gene
  AOLE_RS01530 (AOLE_01480) pilN 328926..329567 (+) 642 WP_013196695.1 PilN domain-containing protein Machinery gene
  AOLE_RS01535 (AOLE_01485) pilO 329564..330313 (+) 750 WP_013196696.1 type 4a pilus biogenesis protein PilO Machinery gene
  AOLE_RS01540 (AOLE_01490) pilP 330324..330851 (+) 528 WP_013196697.1 pilus assembly protein PilP Machinery gene
  AOLE_RS01545 (AOLE_01495) pilQ 330914..333079 (+) 2166 WP_013196698.1 type IV pilus secretin PilQ family protein Machinery gene
  AOLE_RS01550 (AOLE_01500) aroK 333091..333660 (+) 570 WP_004789808.1 shikimate kinase AroK -
  AOLE_RS01555 (AOLE_01505) aroB 333689..334771 (+) 1083 WP_013196699.1 3-dehydroquinate synthase -

Sequence

Protein


Download         Length: 249 a.a.        Molecular weight: 28067.86 Da        Isoelectric Point: 4.7573

>NTDB_id=37671 AOLE_RS01535 WP_013196696.1 329564..330313(+) (pilO) [Acinetobacter oleivorans DR1]
MSPDELHELSLEQAPSKKKQITLEKFLQQFNTLDMNSYGSWPLSVKITCWVFIFFAVLALGYFVVIQPKLQAIDNAQAQE
SNLLNEFREKDSKLRNLQQYQLQLQEMQANFNQQLEQLPKETEIPSLVEDINLTGVSSGLKFKNIRLEDEVKQEIFIEQP
ITMEATGDYHAFGAFVSSIAALPRIVTMHDFVVEAAPVKDSKSDIPVLNYSIKAKTYRYMGAVENAEHSENNASASVAPV
SSTANTQSK

Nucleotide


Download         Length: 750 bp        

>NTDB_id=37671 AOLE_RS01535 WP_013196696.1 329564..330313(+) (pilO) [Acinetobacter oleivorans DR1]
ATGAGTCCAGATGAACTTCATGAGTTGTCGTTAGAACAAGCTCCATCTAAGAAAAAACAGATTACTTTAGAAAAATTTCT
TCAGCAATTTAACACACTAGATATGAACAGTTATGGTAGCTGGCCATTATCTGTGAAAATTACGTGCTGGGTTTTTATTT
TCTTTGCTGTATTGGCTTTAGGATACTTTGTTGTTATTCAACCAAAGTTACAAGCAATTGATAATGCGCAGGCGCAAGAA
AGTAATTTGTTGAATGAGTTTCGCGAAAAGGATTCAAAATTACGTAACTTGCAGCAATATCAACTTCAACTTCAAGAGAT
GCAAGCAAACTTTAATCAGCAGTTAGAACAACTCCCAAAAGAAACCGAGATTCCAAGCTTGGTTGAGGATATTAACTTAA
CTGGTGTGAGCTCTGGTCTGAAGTTTAAAAATATTCGTTTAGAAGATGAAGTGAAGCAGGAAATCTTTATTGAACAGCCT
ATTACGATGGAAGCAACTGGCGATTATCACGCTTTTGGTGCTTTTGTTAGTAGTATTGCGGCATTACCACGTATTGTGAC
GATGCATGATTTTGTTGTAGAAGCTGCACCTGTTAAAGATAGTAAGTCAGATATTCCTGTCCTTAATTATTCTATTAAAG
CAAAAACTTATCGCTATATGGGCGCCGTAGAAAATGCTGAACATTCGGAAAACAACGCTTCGGCTTCAGTAGCACCTGTT
TCCTCTACTGCTAATACACAGTCGAAATAG

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(73-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

81.928

100

0.819
  comO Acinetobacter baylyi ADP1

68.952

99.598

0.687

Multiple sequence alignment