Detailed information NTG0037524

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: TRAD_RS08170
• Genome accession: NC_014221
• Coordinates: 1775520..1776638 (+)
• Length: 372 a.a.
• NCBI ID: WP_013178135.1
• Uniprot ID: D7CYC8
• Organism: Truepera radiovictrix DSM 17093
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1770520..1781638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRAD_RS08150 (Trad_1644)	-	1771082..1772656 (+)	1575	WP_041947200.1	hypothetical protein	-
TRAD_RS08155 (Trad_1645)	-	1772909..1773106 (+)	198	WP_013178132.1	hypothetical protein	-
TRAD_RS08160 (Trad_1646)	-	1773157..1773747 (-)	591	WP_013178133.1	YigZ family protein	-
TRAD_RS08165 (Trad_1647)	cysS	1773989..1775449 (+)	1461	WP_013178134.1	cysteine--tRNA ligase	-
TRAD_RS08170 (Trad_1648)	dprA	1775520..1776638 (+)	1119	WP_013178135.1	DNA-processing protein DprA	Machinery gene
TRAD_RS08175 (Trad_1649)	malZ	1776644..1778542 (-)	1899	WP_013178136.1	maltodextrin glucosidase	-
TRAD_RS08180 (Trad_1650)	-	1778620..1779459 (-)	840	WP_013178137.1	cyclase family protein	-
TRAD_RS08185 (Trad_1651)	-	1779573..1779932 (-)	360	WP_041947201.1	pyridoxal-phosphate dependent enzyme	-
TRAD_RS08190 (Trad_1652)	-	1779965..1780648 (+)	684	WP_013178138.1	Crp/Fnr family transcriptional regulator	-
TRAD_RS08195 (Trad_1653)	-	1780743..1780979 (+)	237	WP_013178139.1	ferredoxin	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 38801.49 Da
• Isoelectric Point: 6.8974

>NTDB_id=37524 TRAD_RS08170 WP_013178135.1 1775520..1776638(+) (dprA) [Truepera radiovictrix DSM 17093]
MPPTPSPLLALAFTPGLGPRKLKALLEHFGDAASLADASAGALREVEGVGPKLAQTIVAFRAEGERRAAEERARAERLGV
QLLTLDDPDYPASLRGIYDPPPVLYVRGTLPAHLQGDLDAVRAVAVVGTRRASPFALELSREIARELARAGVVVVSGLAL
GVDTAAHEGALEAAPGATVAVLGSGVDRPYPAQNARLARRIADGGGAVVSEYRLGTPPRAEHFPGRNRIISGLARGVLVV
EGGVTSGALITAEFALEEGRTVFAVPGRARDPRAAGPLELLKQGAVLTERADDILSELGWRRAPSAPPKRDAPELTGLPQ
ELLTAIRQGGEPLLDDLVTATGRAAPELLSALMTLELKGLVRSLPSGRYAAL

Nucleotide

• Length: 1119 bp

>NTDB_id=37524 TRAD_RS08170 WP_013178135.1 1775520..1776638(+) (dprA) [Truepera radiovictrix DSM 17093]
GTGCCCCCGACGCCCTCCCCCCTGCTCGCCCTCGCGTTTACCCCGGGCCTGGGCCCGCGCAAGCTCAAGGCGCTCCTGGA
GCACTTCGGCGACGCCGCCTCGTTGGCTGACGCCTCCGCCGGGGCGCTCAGGGAGGTCGAGGGGGTCGGCCCGAAGCTCG
CCCAGACGATCGTGGCGTTTCGCGCCGAGGGGGAGCGCAGAGCCGCCGAGGAGCGCGCCCGCGCCGAGCGGCTGGGAGTG
CAGCTCCTCACGTTAGATGACCCCGACTACCCGGCGAGCCTGCGGGGGATTTACGACCCGCCACCCGTGCTCTACGTCCG
CGGGACCCTGCCCGCGCACCTGCAGGGCGACCTGGACGCGGTGCGCGCGGTGGCCGTGGTCGGCACGCGGCGCGCGAGCC
CCTTTGCCCTCGAGCTGAGCCGCGAGATCGCGCGCGAGCTGGCCCGAGCCGGCGTCGTGGTGGTCTCGGGGCTCGCGCTC
GGGGTCGACACCGCCGCGCACGAGGGCGCGCTCGAGGCTGCGCCCGGCGCGACGGTCGCCGTGCTGGGCTCCGGCGTCGA
CCGGCCCTACCCGGCCCAGAACGCGCGCTTGGCGCGGCGCATCGCCGACGGTGGCGGGGCGGTGGTGAGCGAGTACCGCC
TCGGCACGCCGCCCCGCGCCGAACACTTCCCGGGGCGCAACCGCATCATCAGCGGGCTCGCGCGCGGGGTGCTCGTCGTC
GAGGGGGGGGTCACGTCGGGTGCTCTCATCACCGCCGAGTTCGCGCTCGAGGAGGGCCGCACCGTCTTCGCCGTCCCCGG
CCGCGCCCGCGACCCGCGCGCCGCGGGGCCGCTCGAGCTCCTCAAGCAGGGCGCCGTGCTGACCGAGCGCGCCGACGACA
TCTTGAGCGAGCTCGGGTGGCGTCGGGCGCCGAGCGCGCCCCCGAAGCGCGACGCGCCGGAGCTCACCGGCCTCCCCCAG
GAGCTCCTCACCGCCATCCGCCAGGGGGGCGAACCGCTCCTCGACGACCTCGTCACGGCGACCGGCAGAGCCGCCCCCGA
GCTGCTGAGCGCGCTGATGACGCTCGAGCTTAAGGGCCTCGTCCGCAGCCTCCCGAGCGGGCGTTACGCGGCGCTGTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (306-366)

• DNA recombination-mediator protein A (DNA_processg_A) (75-287)

• Helix-hairpin-helix domain (HHH_5) (15-59)

3D structure

• AlphaFold DB: D7CYC8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	51.648	97.849	0.505
dprA	Thermus thermophilus HB27	45.179	97.581	0.441
dprA	Glaesserella parasuis strain SC1401	37.795	100	0.387
dprA	Legionella pneumophila strain ERS1305867	39.612	97.043	0.384
dprA	Vibrio campbellii strain DS40M4	38.587	98.925	0.382