Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | FPL17_RS15835 | Genome accession | NZ_CP041970 |
| Coordinates | 3443181..3443732 (+) | Length | 183 a.a. |
| NCBI ID | WP_159886098.1 | Uniprot ID | - |
| Organism | Acinetobacter dispersus strain NCCP 16014 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3438181..3448732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPL17_RS15830 (FPL17_16020) | - | 3438701..3443179 (+) | 4479 | WP_159886096.1 | hypothetical protein | - |
| FPL17_RS15835 (FPL17_16025) | comE | 3443181..3443732 (+) | 552 | WP_159886098.1 | type IV pilin protein | Machinery gene |
| FPL17_RS15840 (FPL17_16030) | pilE | 3443732..3444166 (+) | 435 | WP_159886100.1 | type IV pilin protein | Machinery gene |
| FPL17_RS15845 (FPL17_16035) | - | 3444641..3445189 (+) | 549 | WP_159886908.1 | GspH/FimT family pseudopilin | - |
| FPL17_RS15850 (FPL17_16040) | pilV | 3445186..3445674 (+) | 489 | WP_159886102.1 | type IV pilus modification protein PilV | Machinery gene |
| FPL17_RS15855 (FPL17_16045) | - | 3445676..3446701 (+) | 1026 | WP_159886104.1 | PilW family protein | - |
| FPL17_RS15860 (FPL17_16050) | pilX | 3446698..3447450 (+) | 753 | WP_159886106.1 | pilus assembly PilX family protein | Machinery gene |
Sequence
Protein
Download Length: 183 a.a. Molecular weight: 20014.81 Da Isoelectric Point: 7.8733
>NTDB_id=375098 FPL17_RS15835 WP_159886098.1 3443181..3443732(+) (comE) [Acinetobacter dispersus strain NCCP 16014]
MIKMDLHVNRGFTLIELMVVVVIVAIFAAIAIPSYQHFTRRAIAAQAQQEIQKIAEQLERHKSKNFTYKGFNARYLYPTP
SSPRVDSFDSSTQTLSLPLESANPTYIITILDGSNANPLLTASSSEGQSWVITAISSDIKNFSFVLTSSGMRCKTITPTN
ININPGSSTPPAKVECGAGSEDW
MIKMDLHVNRGFTLIELMVVVVIVAIFAAIAIPSYQHFTRRAIAAQAQQEIQKIAEQLERHKSKNFTYKGFNARYLYPTP
SSPRVDSFDSSTQTLSLPLESANPTYIITILDGSNANPLLTASSSEGQSWVITAISSDIKNFSFVLTSSGMRCKTITPTN
ININPGSSTPPAKVECGAGSEDW
Nucleotide
Download Length: 552 bp
>NTDB_id=375098 FPL17_RS15835 WP_159886098.1 3443181..3443732(+) (comE) [Acinetobacter dispersus strain NCCP 16014]
ATGATAAAAATGGATCTACATGTTAATCGAGGATTCACTTTGATTGAGTTGATGGTTGTAGTTGTAATTGTGGCAATTTT
TGCAGCAATTGCAATTCCCAGCTATCAGCATTTTACACGTCGAGCAATAGCAGCACAGGCACAGCAAGAAATTCAAAAAA
TCGCTGAGCAATTGGAAAGACATAAGTCTAAAAATTTTACTTATAAAGGATTTAATGCAAGGTATTTATATCCAACACCA
TCATCTCCAAGAGTAGATAGTTTTGATTCCTCAACTCAAACGCTTTCTCTGCCTTTAGAGAGTGCTAATCCGACCTATAT
AATTACTATTTTGGACGGTAGTAATGCCAATCCGTTATTAACAGCATCTAGTTCTGAAGGGCAAAGTTGGGTAATTACTG
CAATAAGCAGTGATATAAAAAATTTTTCATTTGTCCTTACTAGTTCTGGTATGAGATGTAAAACAATTACGCCAACAAAT
ATTAATATTAACCCTGGTTCAAGTACTCCACCTGCCAAGGTGGAGTGTGGTGCAGGAAGTGAGGACTGGTAG
ATGATAAAAATGGATCTACATGTTAATCGAGGATTCACTTTGATTGAGTTGATGGTTGTAGTTGTAATTGTGGCAATTTT
TGCAGCAATTGCAATTCCCAGCTATCAGCATTTTACACGTCGAGCAATAGCAGCACAGGCACAGCAAGAAATTCAAAAAA
TCGCTGAGCAATTGGAAAGACATAAGTCTAAAAATTTTACTTATAAAGGATTTAATGCAAGGTATTTATATCCAACACCA
TCATCTCCAAGAGTAGATAGTTTTGATTCCTCAACTCAAACGCTTTCTCTGCCTTTAGAGAGTGCTAATCCGACCTATAT
AATTACTATTTTGGACGGTAGTAATGCCAATCCGTTATTAACAGCATCTAGTTCTGAAGGGCAAAGTTGGGTAATTACTG
CAATAAGCAGTGATATAAAAAATTTTTCATTTGTCCTTACTAGTTCTGGTATGAGATGTAAAACAATTACGCCAACAAAT
ATTAATATTAACCCTGGTTCAAGTACTCCACCTGCCAAGGTGGAGTGTGGTGCAGGAAGTGAGGACTGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
51.412 |
96.721 |
0.497 |
| pilY2 | Acinetobacter baumannii D1279779 |
45.506 |
97.268 |
0.443 |